Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0575 ATGAGGAATCTTGAAGATTCCGTTGGTGTTCTTGATGTCTACATACATCAAGCTAGGGACATTCATAACATTTGCATATACCACAAGCAAGATGTTTATGCTAAGATTTGCCTCACTAGCAATCCTGACAACACTGTGTCCACCAAGATCATTAATGGAGGTGGAAGGAACCCTGTGTTCGATGAGAATCTTCGCTTAAATGTTAAAACTGTTGATTCATCTCTCAAATGTGAGATATGGATGCTGAGCAGGGTCAAGAATTATCTAGAAGATCAGCTTCTTGGTTTTGCCTTGGTTCCTTTGTCTGAAGTGCTTGTCAAGAATGGAAGAACACTTGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTCTTCCATTCGCCGGCTGGTTTTGTCCAATTGTCCCTCGCATACGCCGGAGCTTCCCCTGATGTCATGGTGATCCCTCCTTCGGTCTCCACCGAGGCTGCAGCCGCCGCCGCCGCCGCTGTGGCTCTGGACCCTGAAACCACCGATTCGCTGGCCAAAGATTTGGATAAAATCGAGTTCCCGGATCCGAAGATTGTGAATGAAGACCAACTGATGGTTTCGGAATATTTTGGGATTTCTTGTGATGAGAACCAGTGTTCTGAAAGTCTGGCCACTTCTGATGCTGATCATCATAGCTCTGATGCAGGTGTTCAACTCGTAGAAAGCTTCTCAGCATGCAGTGTTAAGTCTACTCAACCTTCCATTAACAAGGTTGATTCACCACCAAGCATTGTATCAACAAATGGGGTTTCTTCCCCATCAGTGCAAGCTAGCTCAGACTCGTCTGATGCTGCTGCTCCTCTGGCTGCATCAAAATCCCCCACTCGGGAACAAGTTTCCGGGGCCAAACAAGAGAAACACATGGTGGTGGCATCGGAGGATGTTAAAGATCAAGTGGGTGAGAGTGATTCCTCAAGCAAGGTGGTTCCAAACAAAGAAGATGAAACATTCCCAAAGCCTGTTGTGTCTGTGAACATTGAGCCAGAACCAATGGTGGTTCAGCAGGATATAGTAGATATGTACATGAAAAGCATGCAGCAGTTCACCGAGTCGTTGGCCAAGATGAAGCTTCCAGATATCGATATCGGGTTGCCGAGCTCAGGAAACTCTAGCTCAGACAAGAAATTGGAATCACCAGCATCATCAAAGAGCAACAATAATAACTCCCGTGTGTTTTATGGGAGCAGAGCTTTCTTCTGA 1227 0.4588 MRNLEDSVGVLDVYIHQARDIHNICIYHKQDVYAKICLTSNPDNTVSTKIINGGGRNPVFDENLRLNVKTVDSSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVKNGRTLEKEFSLSSTDLFHSPAGFVQLSLAYAGASPDVMVIPPSVSTEAAAAAAAAVALDPETTDSLAKDLDKIEFPDPKIVNEDQLMVSEYFGISCDENQCSESLATSDADHHSSDAGVQLVESFSACSVKSTQPSINKVDSPPSIVSTNGVSSPSVQASSDSSDAAAPLAASKSPTREQVSGAKQEKHMVVASEDVKDQVGESDSSSKVVPNKEDETFPKPVVSVNIEPEPMVVQQDIVDMYMKSMQQFTESLAKMKLPDIDIGLPSSGNSSSDKKLESPASSKSNNNNSRVFYGSRAFF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0575 408 Pfam C2 domain 9 116 IPR000008 -
Lele27g0575 408 MobiDBLite consensus disorder prediction 288 323 - -
Lele27g0575 408 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 140 IPR035892 -
Lele27g0575 408 MobiDBLite consensus disorder prediction 373 402 - -
Lele27g0575 408 MobiDBLite consensus disorder prediction 368 408 - -
Lele27g0575 408 CDD C2 11 118 - -
Lele27g0575 408 PANTHER EXPRESSED PROTEIN 8 408 - -
Lele27g0575 408 SMART C2_3c 10 113 IPR000008 -
Lele27g0575 408 Gene3D C2 domain 4 150 IPR035892 -
Lele27g0575 408 ProSiteProfiles C2 domain profile. 1 116 IPR000008 -
Lele27g0575 408 MobiDBLite consensus disorder prediction 240 324 - -
Lele27g0575 408 MobiDBLite consensus disorder prediction 240 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0575 Lele-ChrLele27 13467315 13468541 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1515 25 11757055 11758368 Lele27g0575 27 13467315 13468541 hybridization
Lele26g1536 26 11588648 11589997 Lele27g0575 27 13467315 13468541 hybridization