Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1290 ATGATGGAGATAAGTACAGCCAGTAGGTGTTCTTTGGACTCCCAGCCACAGGCAATATTGTTTTCAAGAATTTCAAGAACATCAGGATGGGAAAGCACTCATAGAATTTCTTATAATATAACTTCCCAGAGATTAAGGTTGGGCTATCGAGGCTTGGCCTCTTCCTACCCAATCTTTAATGCAGTATATCCAAATAGGCCGGTTTTCCGTAGAGCACATTCTATGGCAACCAGTTTGGATGAGTCTACATCGCTACTGTCTGAAGGCGATTCTGAGGAAGATGAGGATGCATCTGAAGACTTGAAGGAGAAGATTTTGGAACAACCACTGACAAGTGAACAGATAGCAGCACTACTTGCTGATACTGAAAGAGCGAGGCTTACAAAGAAGCTTAGTGAAGCCAACCAGCATAATCGGTTCCTCAAAAGACAGTTGAAAATAAAGGAGGAATCATTGGTTACCTTCAAAAGTGAGCTTGCTGTCATGGAGCTTGAAGTTCAGGCTTTGGTCAAACTTGCTGAAGAAATAGCTCAGTCTGCTATTCCAGAAGGTTCAAGGAAGATCAAGGGAAAATATATCCAATCTCACCTTGTTTCTCGTTTAGAAGCTATGAATGAGAAATTAAAGGAACAGATAAAGGACGTAGATTCAGTTCAATCCAAGGAGGTTCCTGTATTCTGGGTTGGCATGGCTGAGAGCGTGCAAGTAATGGGCAGCTTTGATGGTTGGAGCCAAGGAGAGTACCTATCACCAGAATATGATGGTTCTTATACAAAGTTCTCTTCAACATTGATGCTCAGACCAGGAAGGTATGAGATCAAATTCTTAGTGGATGGTGAATGGAAGCTTTCACCGGAGTTTCCCACTGTTGGCGAGGGATTAACCAAAAACAATCTGTTAGTTGTGGAATGA 912 0.4221 MMEISTASRCSLDSQPQAILFSRISRTSGWESTHRISYNITSQRLRLGYRGLASSYPIFNAVYPNRPVFRRAHSMATSLDESTSLLSEGDSEEDEDASEDLKEKILEQPLTSEQIAALLADTERARLTKKLSEANQHNRFLKRQLKIKEESLVTFKSELAVMELEVQALVKLAEEIAQSAIPEGSRKIKGKYIQSHLVSRLEAMNEKLKEQIKDVDSVQSKEVPVFWVGMAESVQVMGSFDGWSQGEYLSPEYDGSYTKFSSTLMLRPGRYEIKFLVDGEWKLSPEFPTVGEGLTKNNLLVVE 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1290 303 Coils Coil 124 151 - -
Lele26g1290 303 Gene3D Immunoglobulins 213 302 IPR013783 -
Lele26g1290 303 SUPERFAMILY E set domains 223 302 IPR014756 -
Lele26g1290 303 MobiDBLite consensus disorder prediction 80 99 - -
Lele26g1290 303 Coils Coil 198 221 - -
Lele26g1290 303 CDD E_set_AMPKbeta_like_N 222 302 - -
Lele26g1290 303 FunFam Protein PTST, chloroplastic 215 303 - -
Lele26g1290 303 PANTHER PROTEIN PTST, CHLOROPLASTIC 2 303 - -
Lele26g1290 303 Pfam Glycogen recognition site of AMP-activated protein kinase 226 301 IPR032640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1290 Lele-ChrLele26 8538534 8541804 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1290 26 8538534 8541804 Lele26g1290 26 8538534 8541804 ECH
Lele26g1290 26 8538534 8541804 Lele27g0804 27 16110041 16114733 hybridization
Lele26g1290 26 8538534 8541804 Lele28g1281 28 8567854 8576304 hybridization