Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0804 ATGAGGGCCTCCGCTTCGCCACGTGGCATAATTGCCCCAGTACGTGTCACTATCCCTTCTTCTCGACCACGAAGTTTTCGCTTAGCTTTAGAACTCGAAACTGGAGGAGAATGGATTGACGAAGCGACTGATATACACAGAGCCTGGGTGCATTTTCGTATTCCTTTCATAATGGAGCATGATACCCTATCTGAGTTTTCCGGGGTACGAGTTAATTTTGTTTCAAGACATTAGATTCTGTCAATAACTAGCCGCAAAACGTGTAATTCTTGTACGATCCAAGATCATCTGCAGTTCAGAACTGGCTTGCTTCTGAGTGAATTCCTGTGCCTTTGGTCTCTCCCGTGTGCCTGGGGAGACTTTGATTTGAGGAGAGCTTGTAGTAAAATAGCTCTTCATGATGGAGATAAGTACAACCAGCCACAGGCAATATTGTTTTCAAGAATTTCAAGAACATCAGGATGGGAAAGCACTCATAGAATTTCTTATAATATAACTTCCCAGAGTTCAAGGTTGGGCTATCGAGGCTTGGCCTCTTCCTACCTAGTCTTTAATGCAGTATATCCAAATAGGCCATTTTTCCGTAGGGCACATTCTATGGCAACTAGTTTGGATGAGTCTACATCGCTACAGTCTGAAGGCGATTCTGATGAAGAAGAGGATGCATCTGAAGACTTGAAGGAGAAGATTTTGGAACAACCACTGACAAAAGCACTACTTGCTGATACTGAAAGAGCGAGGCTTACAAAGAAGCTTAGTGAAGCCAACCAGCATAATCGGTTCCTCAAAAGACAGTTGCAAATAAAGGGGGAATCATTGGTTAACTTTAAAACTCGGTCTGCTATTCCAGAAGGTTCAAGGAAGATCAATGGAAAATATATTCAATCTCATCTTGTTTCTCGTTTAGAAGCTATGCATGAGAAATTAAAGGAACAGATAAAGGATGTAGATTCCGTTCAATCCAAGGAGGTTCCTGTATTTTGGGTTGGCATGGCTGAGAGCGTGCAAGTAATGGGCATCTTTGATGGTTGGAGCCAAGGAGAGTACCTATCACCAGATGGTTCTTATACAAAGTTCTCTTCAACATTGATGCTCACACCTGGAAGGTATGAGATCAAATTCTTGGTGGATGGTGAATGGCAACTTTCACCGGAGTTTCCCACTATTGGTGAGGGATTAACCAAAAACAATCTGTTAGTTGTATAA 1206 0.4237 MRASASPRGIIAPVRVTIPSSRPRSFRLALELETGGEWIDEATDIHRAWVHFRIPFIMEHDTLSEFSGVRVNFVSRHXILSITSRKTCNSCTIQDHLQFRTGLLLSEFLCLWSLPCAWGDFDLRRACSKIALHDGDKYNQPQAILFSRISRTSGWESTHRISYNITSQSSRLGYRGLASSYLVFNAVYPNRPFFRRAHSMATSLDESTSLQSEGDSDEEEDASEDLKEKILEQPLTKALLADTERARLTKKLSEANQHNRFLKRQLQIKGESLVNFKTRSAIPEGSRKINGKYIQSHLVSRLEAMHEKLKEQIKDVDSVQSKEVPVFWVGMAESVQVMGIFDGWSQGEYLSPDGSYTKFSSTLMLTPGRYEIKFLVDGEWQLSPEFPTIGEGLTKNNLLVV 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0804 401 CDD E_set_AMPKbeta_like_N 323 401 - -
Lele27g0804 401 SUPERFAMILY E set domains 324 399 IPR014756 -
Lele27g0804 401 MobiDBLite consensus disorder prediction 205 226 - -
Lele27g0804 401 Coils Coil 299 322 - -
Lele27g0804 401 Pfam Glycogen recognition site of AMP-activated protein kinase 327 392 IPR032640 -
Lele27g0804 401 Gene3D Immunoglobulins 314 401 IPR013783 -
Lele27g0804 401 Coils Coil 245 265 - -
Lele27g0804 401 MobiDBLite consensus disorder prediction 211 225 - -
Lele27g0804 401 PANTHER PROTEIN PTST, CHLOROPLASTIC 143 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0804 Lele-ChrLele27 16110041 16114733 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0804 27 16110041 16114733 Lele27g0804 27 16110041 16114733 ECH
Lele25g1280 25 8627201 8627784 Lele27g0804 27 16110041 16114733 hybridization
Lele26g1290 26 8538534 8541804 Lele27g0804 27 16110041 16114733 hybridization