Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1139 ATGGCAATCTCAGAAGAAGAAAATCAATTTTCATTTCCTCTAATCCCTAAAAATGGCCACAATACGCAGAATTTTTACAATGACGACGATGAAGAAGACGACTCTGAGGAAGTCGAGGATGATGAAGACAACGACCAACAGGATCTTCTTGCTCGAGTCCATGATGTGCTAATAAGGGGGAATACGAAAACCAAGGGTTGGGTGATCGAGGTCGAAGTGGAGGAGATAAAGAACGCCACAACTATGCAAGAGCTGATAGAAGCGGCCAAAATTGCCAATGTGAAGCTTCATAGCCTCCACATATTTGATGCGGTCAACATTGAGCTTGAACCAGGACCGCCAGAGTTGGCTGGTACTGCCAATGTCGTCATTGAGGTCTCAGAGACCGATAGCAAACCTTCTGGTGAAGTCGGCGTTTATTCAAAACCCGCGGTACAGAGAACCATTGATGCCCATTTATCTTCTATTTGTTCAACTGGCTATTCGTTAGGCTTCAGAGAGGCTCCAGTTAATGTTATTTATATTTTGCCTGATGCAGACTATTTGATTGGAAAGAAGTACTTCAAGGAACATACTTTACAATGGATATCAGAAGAAATTCCAAATACCTTATCTACTTGTGCTCTAAAGTTCAAAAATTTGCTAGGCTATGGTGATCTATGGGATGGTTCTCTAGCATATGGTCCCAATCAAACTTCAGAGATCGACCAGAGGAAGTCACCGGTTAGACCCACAAAAGGATTTGCTTTTCTTTCTACAAGTCAATTAGGTGGCCTTGCACCGGATCACAGGAGCTTGCGGTTTCTGCGTCAGGAGTTTGATGTTCGATATGCCATTCCTTTTGGGTTTTTTCATGCTGCGCTCAACCTTGGAATCTCTGCTGGTGTCATTTTTCCATGGGGCCATCGGTTCTTGAACAAGCCTTCTCCCCTGCCAGAAATGTTTTTCTTGGGTGGTGATTTCTCTCCAGTTTGCACCCTAGGAGGGCCAACGACATTATGGGGATTCGGGACAAGGGCATTAAGCCCTAGTGAACCACGAAGACAAAGTAATATTAGAGATGGAAATAATGATGACAATGTTGATTCCTCTAGAAGGGACTTCGATGGAGGAGATCTTGCCATTACTGCTTTTGCATACCTCCCTTTTGATTTTCCAGTTGGCTGGTTAAGAGAACGTGAAATCCATGGACATGTTTTTGTTGGTGCCGGGAATATTGCCAAGTTAGCTGAGAATGAGTACAGGAAGTTCTGTCCCAAAAAGTTTTTGGATTCATTTCGAACATCCGTGGGATGTGGAATTGTCATTCCAACTAAAATATTTCGCCTAGAGGGTAACTTCTACTATATACTCAGGCAGCATGAGCATGATCGTGGAAAGAGGTTGAGCTTCTCCGTTCCTTCATAG 1407 0.4357 MAISEEENQFSFPLIPKNGHNTQNFYNDDDEEDDSEEVEDDEDNDQQDLLARVHDVLIRGNTKTKGWVIEVEVEEIKNATTMQELIEAAKIANVKLHSLHIFDAVNIELEPGPPELAGTANVVIEVSETDSKPSGEVGVYSKPAVQRTIDAHLSSICSTGYSLGFREAPVNVIYILPDADYLIGKKYFKEHTLQWISEEIPNTLSTCALKFKNLLGYGDLWDGSLAYGPNQTSEIDQRKSPVRPTKGFAFLSTSQLGGLAPDHRSLRFLRQEFDVRYAIPFGFFHAALNLGISAGVIFPWGHRFLNKPSPLPEMFFLGGDFSPVCTLGGPTTLWGFGTRALSPSEPRRQSNIRDGNNDDNVDSSRRDFDGGDLAITAFAYLPFDFPVGWLREREIHGHVFVGAGNIAKLAENEYRKFCPKKFLDSFRTSVGCGIVIPTKIFRLEGNFYYILRQHEHDRGKRLSFSVPS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1139 468 MobiDBLite consensus disorder prediction 340 365 - -
Lele26g1139 468 MobiDBLite consensus disorder prediction 1 46 - -
Lele26g1139 468 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 227 466 IPR039910 -
Lele26g1139 468 FunFam Outer membrane OMP85 family protein 50 129 - -
Lele26g1139 468 MobiDBLite consensus disorder prediction 351 365 - -
Lele26g1139 468 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 178 467 - -
Lele26g1139 468 Pfam Omp85 superfamily domain 234 466 IPR000184 GO:0019867
Lele26g1139 468 Gene3D membrane protein fhac 50 129 - -
Lele26g1139 468 MobiDBLite consensus disorder prediction 27 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1139 Lele-ChrLele26 7321405 7325412 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1138 25 7325209 7334174 Lele26g1139 26 7321405 7325412 CCT
Lele26g1139 26 7321405 7325412 Lele26g1139 26 7321405 7325412 ECH
Lele26g1139 26 7321405 7325412 Lele27g0942 27 17332425 17336420 hybridization
Lele26g1139 26 7321405 7325412 Lele28g1130 28 7309077 7313544 hybridization