Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1130 ATGCAAGAGCTAGTAGAAGCGGCCAAAATTGCCAATGCGAAGCTTCATAACCTCCAGATATTTGATTTGGTCAACATTGAGCTTGAACCAGGACCGCCCGAGTTGGCTGGTACTGCCAATGTCGTCATTGAGGCTTCAGAGAGGCTCCAGTTAAGTTTTGAGAAAGCGGCTACTCTTGACCTTGTGCAGTCCATGTCATCTTTTAGTAAGACCTTCGATTATTCTCTATGGATGACACAGGCTAGTTCTTGGTCTCTTGAAGGTGCTCTAAAGTTCAAAAATTTGTTAGATCCATCACAAATGTCATCCAGATCTATTAGGAGGCAGATTGGACATGGTTTATTGTCATCTTTGAAATATACATTTAAGATCGACCAGAGGAATTCACCAGTTAGATCTACAAAAGGATATGCTTTTCTCTCTACAACTCAATTAGGTGGCCTTGCACCGGATCACAGGAGCTTGCGGTTTCTGCGTCAGGAGTTTAATGTTCGATATGCCATTCCTTTGGGATTTTTTCATACTGTGCTCAACCTTGGAATCTCTGCTGGTGTCATTTTTCCATGTGGCCATGGGTTCTTGAACAAGCCTTCTCCCCTGCCAGAAAGGACAAGGGCATTACAAAGACAAAGTAATAGTAGAGATGGAAATAATGATGACAATGTTGATTCCTCTAGAAGGGACTTCGTTGGAGGAGATCTTGCCATTACCGCTTTTGCAGACCTCTCTTTTGATTTTCCAGTTGGCTGGTTAAGAGAACGTGAAATCCATGGGCATGATTTTGTTGGTGCCGGGAATATTGCCAAGTTAGCTGAGAATGAGTACAGGAAGTTCTCTCCCAAAAAGTTTTTGGATTCATTTCGAACATCTGTAGGATGTGGAATTGTCATTCCAACTAAAATATTTCGCCTAGAGGACCTTGACCTTGAGCATACGTATCGCTATGATACAAAGATCAGTTGTAATCCGTTGATCCCGACTCAAGCATTAGGAATCTGA 999 0.4244 MQELVEAAKIANAKLHNLQIFDLVNIELEPGPPELAGTANVVIEASERLQLSFEKAATLDLVQSMSSFSKTFDYSLWMTQASSWSLEGALKFKNLLDPSQMSSRSIRRQIGHGLLSSLKYTFKIDQRNSPVRSTKGYAFLSTTQLGGLAPDHRSLRFLRQEFNVRYAIPLGFFHTVLNLGISAGVIFPCGHGFLNKPSPLPERTRALQRQSNSRDGNNDDNVDSSRRDFVGGDLAITAFADLSFDFPVGWLREREIHGHDFVGAGNIAKLAENEYRKFSPKKFLDSFRTSVGCGIVIPTKIFRLEDLDLEHTYRYDTKISCNPLIPTQALGI 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1130 332 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 78 305 IPR039910 -
Lele28g1130 332 MobiDBLite consensus disorder prediction 198 225 - -
Lele28g1130 332 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 40 309 - -
Lele28g1130 332 MobiDBLite consensus disorder prediction 204 218 - -
Lele28g1130 332 Pfam Omp85 superfamily domain 76 304 IPR000184 GO:0019867
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1130 Lele-ChrLele28 7309077 7313544 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1138 25 7325209 7334174 Lele28g1130 28 7309077 7313544 CCT
Lele28g1130 28 7309077 7313544 Lele28g1130 28 7309077 7313544 ECH
Lele25g1138 25 7325209 7334174 Lele28g1130 28 7309077 7313544 hybridization
Lele26g1139 26 7321405 7325412 Lele28g1130 28 7309077 7313544 hybridization