Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0868 ATGTCCAAATCCAGATCAACGCCGTTCATTTCTCCTATGGTTTTCAATGAAAGTCACGAGTCCCCAGATGAGGTCATCCATGCTGTGGCTGACCACATCTCTGAGCTTCCCGACGGGTGTTTGGCTTGCATTTTTCAGTCATTAAGCTCCGCCGACCGTAACCGCTGTTCTCTCGTGTGCCGGCGGTGGTTCCAGGTCGAGGGACAGAGTCGTCACCGTCTCTCCCTTAACGCTCAATTGGATCTTCTCCCGGTTATCCCCTCTCTTTTCTCACGTTTCGATTCCGTCACGAAGCTCGCTTTGAAATGCCACCGTAGATCCGTTAGCATCGGGGATGAAGCGCTCGTTCTTATCTCTCAACGATGCCCTAATCTGACTCGCCTGAAACTCCGGGCCTGCCGCGAACTTACGGATGCTGGCATGGAGGTCGTTGCTAAGAATTGCAAGGGTTTGAAGAAACTTTCCTGTGGATCTTGCACTTTTGGAGCCCAAGGCATGAACGCAGTGCTCAATCATTGCGCCTCTATAGAAGAATTATCTGTCAAGCGTCTCCGGGGAATTACGGATGTAGCATCGGTGGAGTCTATTGGACCTGGTGTTGCAGCGTCATCTCTCAAAACCATTTGTTTAAAAGAGCTATATAATGGACAATGTTTTGGGCCACTTATTCTTGGCTCGAATAATTTAAGGACTTTAAAGATTTTCAGGTGCTCTGGCGATTGGGATAGACTTTTTCAACTCCTAGCAGATCGAGCGCCAAGTATAGTCGAAGTCCACCTTGAGAGGCTCCAGACAAGCGATGTTGGCTTAGAAGCAATCTCGAATTGCTCGAGTCTGGAAGTCTTGCATCTTGTCAAGACTCCAGAGTGCACAGATTTAGGGCTTAACGCGATTGCAGAACGATGTAGGCTCTTAAGGAAACTTCATATTGACGGGTGGAAGACGAATCGTATAGGAGATGAAGGTCTAATAGTAGTCGCTAAGTGTTGCCCATATCTTCAGGAATTGGTCCTTATTGGTGTCAATCCCACTAATGCGAGTTTGGAAATGTTGGCATCCAATTGCCTGAATCTGGAGAGGTTGGCGTTATGTGGAAGTGAAACAGTTGGTGATGTTGAAATATCGTGCATTGCAACCAAATGCTTGGCATTGAAGAAACTCTGTATTAAGAGCTGCCCTGTGTCTGACCATGGTATGGAAGCACTGGCATCTGGTTGCCCGAATTTGCTGAAAGTAAAGGTTAAGAAGTGCAAGGGTGTGACCTCTCAGGGTGCAGATTTGCTGAGGCTATGTAGGGAGTCGCTTGCTGTAAATTTACACGCTGGTGAAAAAGAACATCAGGACGCAAGTGCTAGTGATGGTGGAGCTCAAGAAAATGGCATAGAAATTCCTTCAAACCACAGCGAAGATGCGGCCTCGGCCACCATTGCATCAAGCAGTACTGGGCGATCAAGTTCATTCAAGTCAAGGCTAGGACTTTTCTCTGGGAAAAGCTACATCGTATGCACTTTGAGAAGATTGTCTGGTGGTTACTGTAGTTCCCGGCATAGTTAG 1554 0.4749 MSKSRSTPFISPMVFNESHESPDEVIHAVADHISELPDGCLACIFQSLSSADRNRCSLVCRRWFQVEGQSRHRLSLNAQLDLLPVIPSLFSRFDSVTKLALKCHRRSVSIGDEALVLISQRCPNLTRLKLRACRELTDAGMEVVAKNCKGLKKLSCGSCTFGAQGMNAVLNHCASIEELSVKRLRGITDVASVESIGPGVAASSLKTICLKELYNGQCFGPLILGSNNLRTLKIFRCSGDWDRLFQLLADRAPSIVEVHLERLQTSDVGLEAISNCSSLEVLHLVKTPECTDLGLNAIAERCRLLRKLHIDGWKTNRIGDEGLIVVAKCCPYLQELVLIGVNPTNASLEMLASNCLNLERLALCGSETVGDVEISCIATKCLALKKLCIKSCPVSDHGMEALASGCPNLLKVKVKKCKGVTSQGADLLRLCRESLAVNLHAGEKEHQDASASDGGAQENGIEIPSNHSEDAASATIASSSTGRSSSFKSRLGLFSGKSYIVCTLRRLSGGYCSSRHS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0868 517 Gene3D Ribonuclease Inhibitor 69 470 IPR032675 -
Lele26g0868 517 MobiDBLite consensus disorder prediction 442 488 - -
Lele26g0868 517 SMART fbox_2 36 76 IPR001810 GO:0005515
Lele26g0868 517 FunFam F-box/LRR-repeat protein 3 isoform X1 32 72 - -
Lele26g0868 517 Gene3D - 30 68 - -
Lele26g0868 517 PANTHER UNCHARACTERIZED 35 439 - -
Lele26g0868 517 MobiDBLite consensus disorder prediction 459 488 - -
Lele26g0868 517 FunFam F-box protein SKIP2 68 449 - -
Lele26g0868 517 SUPERFAMILY F-box domain 20 66 IPR036047 GO:0005515
Lele26g0868 517 SMART LRR_CC_2 148 172 IPR006553 -
Lele26g0868 517 SMART LRR_CC_2 173 199 IPR006553 -
Lele26g0868 517 SMART LRR_CC_2 276 301 IPR006553 -
Lele26g0868 517 SMART LRR_CC_2 355 380 IPR006553 -
Lele26g0868 517 SMART LRR_CC_2 406 430 IPR006553 -
Lele26g0868 517 SMART LRR_CC_2 302 329 IPR006553 -
Lele26g0868 517 SMART LRR_CC_2 330 354 IPR006553 -
Lele26g0868 517 SMART LRR_CC_2 381 405 IPR006553 -
Lele26g0868 517 SMART LRR_CC_2 122 147 IPR006553 -
Lele26g0868 517 Pfam Leucine Rich repeat 122 144 IPR001611 GO:0005515
Lele26g0868 517 SUPERFAMILY RNI-like 83 434 - -
Lele26g0868 517 Pfam F-box 35 72 IPR041567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0868 Lele-ChrLele26 5554978 5556531 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0868 26 5554978 5556531 Lele27g1224 27 19201031 19202650 hybridization
Lele26g0868 26 5554978 5556531 Lele28g0849 28 5459551 5461170 hybridization