Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0823 ATGGTTGAACTTCATAGAATCAGTTCAAATTTAATAGACTGGAAGCCTTCTCCGGTAGTATCTTTAGCCACCAGCGTCGATGGTTTGCAGGTCGCCGCTGCCCGTGAAGATGGCTCCTTGGAGATTTGGCTTGTCTCCCCCGGTTCCGTCGGCTGGCACCGTCAGTTGACTATTCATGGAGACCCTAATGTAAGAGTATCCTCACTTGTTTGGTGCCACGGGGGTTCAAGGGGAATGGCATTCGGTCGATTATTCTCATCTAACATCGATGGTTCAGTCTGTAAGTGGGATCTTTCCCACTTGACACAGAAGACTGTGTTGGGTTCAATTGGTGTCTCAATCTGGCAAATGGCGCTGGCACCATCTAAAAGTGACTTAGTTAATACTGAAGCAGAGCCTAATCATGTGGGGAATGGATATTTGACTTATAATAATGACAATGATCTTGATGAACATGAAACTAGTGGTAGTGACAGCGAAGAAGAGTCTGACTCATCGAATACTCTTAAAGCAATTGAATATCCACGTGTCGCAATTGGTTGTGATGATGGATGTGTGCGAATATATGCCATCTCAGACACAGATGAGTTCGTGTGTACAAAATTGTTGCCTCGGGTCAGTGGACGAGTTTTAAGTGTGACGTGGAGTACAGATGCAAATTTCATATATTCCGGAAGTAGTGATGGCTTGATACGATGCTGGGATGCTACACTGGGTCGTGAAATCTATAGGATTACAGCTGGGCTTGGAGGTCTGGGCAGTGGAACCGAACTTTGTATTTGGTCCTTACTTTCCTTAAGGTCTGGGACACTGGTTAGTGCAGACAGCAGTGGTAGTGTCCAGTTTTGGGACGGGCAACAAGGAACTCACTTACAAGCACATTCATTTCACAAGGGAGATGTAAATGCACTGGCTGCAGCTCCAACTCATAACCGAGTGTTCTCTGCTGGCTCTGATGGCAAGGTTATCCTGTATAAGCTCTCCAGTGAGTCAGTGTCATCCAACAGTGTTGAGTTACCAGCTGTAATGAAGAGATGGGTTTATGTTGATTACGTGAGGGCTCATACACATGATGTCAGGGCCTTGACTGTGGCAGTACCAATTTGTCGAGAAGATCCCTTGCCAGATGAGAAGATTAAAAGAGCTCGTAGTCAGGAAAAACCCATTGATTTTAGTTATCGTAAATGGGCCCATTTGGGTGTTCCCATGCTGATATCAACAGGTGATGACACAAAACTCTTTGCATATGCTGTAAAGGAGTTCACTAAATTCTCTCCACATGATATCTGCCCTGCACCACAGAGAGCCCCCATTCAACTAGTTCCAAAAACAGCCTCCAATCAATCAGCAATTATTTTAGTCCAGTCTTCTCACTGTTTAGATATTCTTTCTGTGCAACCCAAAAAAGGTGTCTTACCTGACATTACGCGTCCCACTTCTGGTGGCTTTTCAAAAAGTGAGCTGCTTGCACAAGTTAAGAGCAAATTATCTCGGAAAATAATTTGCAGCACTATTGCTGATTCAGGTGTGCTGTTTGCATACTCTGATCATGTGAAGCCTAGTTTATTTGAATTGAAGAGCCCTAAAGTTGGGAGAGGTGCATGGAATGTTATAAAAAGGAAACTCCCTGATAGACTACCATTTGCTCATTCTATGATTTTTACTCACGATTCCTCTCGGTTGATAGTAGCTGGGCATGATCGAAGGATATATATTGTGGACGTGGGAAGTTCAGGATTAGTGCATGTCTTTACCCCATCCCGTGAGATGCTAGATGAGGGGTTACCTCCGACTGAACCTCCCATAACACGGATGTTTGCCAGTTCTGATGGGCAGTGGTTGGCGGCTGTGAATTGCTTTGGAGATGTATATGTATTCAATCTCGAGATACTAAGGCAGCACTGGTTCATTTCTAGATTAGATGGCGCCTCCGTTACTGCTGGTGGATTTCCTCCCCAGAACAGCAATGTACTTATAGTTACAACTTCTTCAAATCAAGTGTATGCATTGGATGTAGAGGCCAAGCAGTTGGGAGAATGGTCAATACGGCATTCATTTGTTCTTCCAAAGAGATTCCAGGAATTTCCTGGTGAAGTCATTGGGCTCTCATTCCCTCCCTCAACGTCATCTTCTGTGGTTGTCTACAGTGCCAGGGCAATGTGCTTGATCGATTTTGGGCTGCCAGTGGAGCAAGATGATGGTGATCTATTAAATGCTCAAGATTCAATGGCTAAAAATATACAAAATTTTATCAAGAGGAAACAAAGGCAAAGCCATAGGAAGAATTTTGAAATTTTGGAATTCAGGGATCCAGTTTTATTTTTAGCCCATCTTTCAAAAAGTTCCGTCTTATTAGTAGACAGGCCGTGGTTAGAAGTGGTAAAAAGTTTAGAAGCCCAACCAGTCCACAGACATATTTTTGGGACATAA 2430 0.4379 MVELHRISSNLIDWKPSPVVSLATSVDGLQVAAAREDGSLEIWLVSPGSVGWHRQLTIHGDPNVRVSSLVWCHGGSRGMAFGRLFSSNIDGSVCKWDLSHLTQKTVLGSIGVSIWQMALAPSKSDLVNTEAEPNHVGNGYLTYNNDNDLDEHETSGSDSEEESDSSNTLKAIEYPRVAIGCDDGCVRIYAISDTDEFVCTKLLPRVSGRVLSVTWSTDANFIYSGSSDGLIRCWDATLGREIYRITAGLGGLGSGTELCIWSLLSLRSGTLVSADSSGSVQFWDGQQGTHLQAHSFHKGDVNALAAAPTHNRVFSAGSDGKVILYKLSSESVSSNSVELPAVMKRWVYVDYVRAHTHDVRALTVAVPICREDPLPDEKIKRARSQEKPIDFSYRKWAHLGVPMLISTGDDTKLFAYAVKEFTKFSPHDICPAPQRAPIQLVPKTASNQSAIILVQSSHCLDILSVQPKKGVLPDITRPTSGGFSKSELLAQVKSKLSRKIICSTIADSGVLFAYSDHVKPSLFELKSPKVGRGAWNVIKRKLPDRLPFAHSMIFTHDSSRLIVAGHDRRIYIVDVGSSGLVHVFTPSREMLDEGLPPTEPPITRMFASSDGQWLAAVNCFGDVYVFNLEILRQHWFISRLDGASVTAGGFPPQNSNVLIVTTSSNQVYALDVEAKQLGEWSIRHSFVLPKRFQEFPGEVIGLSFPPSTSSSVVVYSARAMCLIDFGLPVEQDDGDLLNAQDSMAKNIQNFIKRKQRQSHRKNFEILEFRDPVLFLAHLSKSSVLLVDRPWLEVVKSLEAQPVHRHIFGT 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0823 809 Gene3D - 6 134 IPR015943 GO:0005515
Lele26g0823 809 ProSiteProfiles Trp-Asp (WD) repeats profile. 294 335 IPR001680 GO:0005515
Lele26g0823 809 Gene3D - 166 258 IPR015943 GO:0005515
Lele26g0823 809 Gene3D - 259 474 IPR015943 GO:0005515
Lele26g0823 809 MobiDBLite consensus disorder prediction 147 167 - -
Lele26g0823 809 Pfam WD domain, G-beta repeat 210 235 IPR001680 GO:0005515
Lele26g0823 809 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 203 235 - -
Lele26g0823 809 ProSiteProfiles Trp-Asp (WD) repeats profile. 203 244 IPR001680 GO:0005515
Lele26g0823 809 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 809 IPR044622 GO:0010073|GO:0035266
Lele26g0823 809 SUPERFAMILY WD40 repeat-like 269 713 IPR036322 GO:0005515
Lele26g0823 809 SMART WD40_4 287 326 IPR001680 GO:0005515
Lele26g0823 809 SMART WD40_4 539 574 IPR001680 GO:0005515
Lele26g0823 809 SMART WD40_4 196 235 IPR001680 GO:0005515
Lele26g0823 809 SMART WD40_4 51 97 IPR001680 GO:0005515
Lele26g0823 809 SMART WD40_4 246 284 IPR001680 GO:0005515
Lele26g0823 809 SMART WD40_4 8 44 IPR001680 GO:0005515
Lele26g0823 809 SUPERFAMILY WD40 repeat-like 16 331 IPR036322 GO:0005515
Lele26g0823 809 Gene3D - 505 723 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0823 Lele-ChrLele26 5279189 5285377 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0823 26 5279189 5285377 Lele27g1266 27 19457147 19462536 hybridization
Lele26g0823 26 5279189 5285377 Lele28g0809 28 5202189 5207913 hybridization