Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0809 ATGGTTGAACTTCATAGAATCAGTTCAAATTTAATAGACTGGAAGCCTTCTCCGGTAGTATCTTTAGCCACCAGCGTCGATGGTTTGCAGGTCGCCGCTGCCCGTGAAGATGGCTCCTTGGAGATTTGGCTTGTCTCCCCCGGTTCCGTCGGCTGGCACCGTCAGTTGACTATTCATGGAGACCCTAATGTAAGAGTATCCTCACTTGTTTGGTGCCACGGGGGTTCAAGGGGAATGGCATTCGGTCGATTATTCTCATCTAACATCGATGGTTCAGTCTGTAAGTGGGATCTTTCCCACTTGACACAGAAGACTGTGTTGGGTTCAATTGGGGTCTCAATCTGGCAAATGGCGCTGGCACCATATAAAAGTGACTTAGTTAATACTGAAGCAGAGCCTAATCATATGGGGAATGGATATTTGACTTATAATAATGACAATGATCGTGATGAACATGAAACTAGTGATAGTGACAGCGAAGAAGAGTCTGACTCATCGAATTCTCTTAAAGCAATTGAATATCCACGGGTGGCAATTGGTTGTGATGATGGATGTGTGCGAATATATGCCATCTCAGACACAGATGAGTTCATGTGTACAAAATTGTTGCCTCGGGTCAGTGGACGAGTTTTAAGTGTGACTTGGAGTACAGATGCAAATTTCATATATTCAGGAAGTAGTGATGGCTTGATACGATGCTGGGATGCTACACTAGGTCGTGAAATCTATAGGATTACAGCTGGGCTTGGAGGTCTGGGCAGTGGAACCGAACTTTGTATTTGGTCGTTACTTTCCTTAAGGTCTGGGACACTGGTTAGTGCAGACAGCAGTGGTAGTGTCCAGTTTTGGGACGGGCAACAAGGAACTCACTTACAAGCACATTCATTTCACAAGGGAGATGTAAATGCACTGGTTGCAGCTCCAACTCATAACCGAGTGTTCTCTGCTGGCTCTGATGGCAAGGTTATCCTGTATAAGCTCTCCAGTGAGTCAGTGTCATCCAATAGTGTTGAGTTACCAGCTGTAATGAAGAGGTGGGTTTATGTTGATTACGTGAGGGCTCATACACATGATGTCAGGGCCCTGACTGTGGCAGTACCAATTTGTCGAGAAGATCCCATGCCAGATGAGAAGATTAAAAGAGCTCGTAGTCGGGAAAAACCCATTGATTTTAGTTATCGTAAATGGGCCCATTTGAGTGTTCCCATGCTGATATCAGCAGGTGATGACACAAAACTCTTTGCATATGCTGTAAAGGAGTTCACTAAATTCTCTCCACATGATATCTGCCCTGCACCTCAGAGAGCCCCCATTCAACTAGTTCCAAAAACAGCCTCCAATCAACCAGCAATTATTTTAGTCCAGTCTTCTCACTGTTTAGATATTCTTTCTGTGCAACCCAAAAAAGGTGTCTTACCTGACATTACGCGTCCCACTTGTGGCTTTTCAAAAAGTGTGCTGCTTGCTCGAGTTAAGAGCAAATTATCTCGGAAAATAATTTGCAGCACTATTGCTGATTCAGGTGTGCTGTTTGCATACTCTGATCATATGAAGCCTAGTTTATTTGAATTGAAGAGCCCTAAAGTTGGGAGAGGTGCATGGAGTGTTATGAAAAGGAAACTCCCTGATAGACTACCATTTGCTCATTCTATGATTTTTACTCATGATTCCTCTCGGTTGATAGTAGCTGGGCATGATCGAAGGATACATATTGTGGACGTGGGAAGTTCAGGATTAGTGCATGTCTTTACCCCATCCCGTGAGATGCTAGATGAGGGGTTAACTCCGACTGAACCTCCCATAACAAGGATGTTTGCCAGTTCTGATGGGCAGTGGCTGGCGGCTGTGAATTGCTTTGGAGATGTATATGTATTCAATCTCGAGATATTAAGGCAGCACTGGTTCATTTCTAGATTAGATGGCGCCTCCGTTACTGCTGGTGGATTTCCTCCCCAGAACAGCAATGTACTTATAGTTACAACTTCTTCAAATCAAGTGTATGCATTGGATGTAGAGGCCAAGCAGTTGGGAGAATGGTCAATACGGCATTCATTTGTTCTTCCAAAGAGATTCCAGGAATTTCCTGGTGAAGTCATTGGGCTCTCATTCCCAACGTCGTCTTCTGTTGTTGTCTACAGTGCCAGGGCAATGTGCTTGATCGATTTTGGGCTGCCAGTGGAGCAAGATGATGGTGACCTATTAAATGCTCAAGATTCAATGGCTAAAAGTATACAAAATTTTATCAAGAGGAAACAAAGACAAAGCCATAGGAAGAATTTTGAAATTTTGGAATTCGGGGATCCAGTTTTATTTTTAGCCCATCTTTCAAAAAGTTCCGTCTTATTAGTAGACAAGCCGTGGTTAGAAGTGGTAAAAAGTTTAGAAGCCCAGCCAGTCCACAGACATATTTTTGGGACATAA 2421 0.437 MVELHRISSNLIDWKPSPVVSLATSVDGLQVAAAREDGSLEIWLVSPGSVGWHRQLTIHGDPNVRVSSLVWCHGGSRGMAFGRLFSSNIDGSVCKWDLSHLTQKTVLGSIGVSIWQMALAPYKSDLVNTEAEPNHMGNGYLTYNNDNDRDEHETSDSDSEEESDSSNSLKAIEYPRVAIGCDDGCVRIYAISDTDEFMCTKLLPRVSGRVLSVTWSTDANFIYSGSSDGLIRCWDATLGREIYRITAGLGGLGSGTELCIWSLLSLRSGTLVSADSSGSVQFWDGQQGTHLQAHSFHKGDVNALVAAPTHNRVFSAGSDGKVILYKLSSESVSSNSVELPAVMKRWVYVDYVRAHTHDVRALTVAVPICREDPMPDEKIKRARSREKPIDFSYRKWAHLSVPMLISAGDDTKLFAYAVKEFTKFSPHDICPAPQRAPIQLVPKTASNQPAIILVQSSHCLDILSVQPKKGVLPDITRPTCGFSKSVLLARVKSKLSRKIICSTIADSGVLFAYSDHMKPSLFELKSPKVGRGAWSVMKRKLPDRLPFAHSMIFTHDSSRLIVAGHDRRIHIVDVGSSGLVHVFTPSREMLDEGLTPTEPPITRMFASSDGQWLAAVNCFGDVYVFNLEILRQHWFISRLDGASVTAGGFPPQNSNVLIVTTSSNQVYALDVEAKQLGEWSIRHSFVLPKRFQEFPGEVIGLSFPTSSSVVVYSARAMCLIDFGLPVEQDDGDLLNAQDSMAKSIQNFIKRKQRQSHRKNFEILEFGDPVLFLAHLSKSSVLLVDKPWLEVVKSLEAQPVHRHIFGT 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0809 806 MobiDBLite consensus disorder prediction 137 167 - -
Lele28g0809 806 Gene3D - 160 430 IPR015943 GO:0005515
Lele28g0809 806 SMART WD40_4 196 235 IPR001680 GO:0005515
Lele28g0809 806 SMART WD40_4 287 326 IPR001680 GO:0005515
Lele28g0809 806 SMART WD40_4 152 190 IPR001680 GO:0005515
Lele28g0809 806 SMART WD40_4 51 97 IPR001680 GO:0005515
Lele28g0809 806 SMART WD40_4 246 284 IPR001680 GO:0005515
Lele28g0809 806 SMART WD40_4 538 573 IPR001680 GO:0005515
Lele28g0809 806 SMART WD40_4 8 44 IPR001680 GO:0005515
Lele28g0809 806 Pfam WD domain, G-beta repeat 210 235 IPR001680 GO:0005515
Lele28g0809 806 Gene3D - 7 136 IPR015943 GO:0005515
Lele28g0809 806 Gene3D - 490 716 IPR015943 GO:0005515
Lele28g0809 806 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 203 235 - -
Lele28g0809 806 ProSiteProfiles Trp-Asp (WD) repeats profile. 203 244 IPR001680 GO:0005515
Lele28g0809 806 SUPERFAMILY WD40 repeat-like 268 707 IPR036322 GO:0005515
Lele28g0809 806 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 806 IPR044622 GO:0010073|GO:0035266
Lele28g0809 806 SUPERFAMILY WD40 repeat-like 16 331 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0809 Lele-ChrLele28 5202189 5207913 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0812 25 5228589 5233977 Lele28g0809 28 5202189 5207913 hybridization
Lele26g0823 26 5279189 5285377 Lele28g0809 28 5202189 5207913 hybridization