Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0795 ATGGCTTCTCCTCCTCCGTCGTATCAGACAGATCTTCCTCTGCCCTCTGACTCTCAAACTGGCGACAAGCTTCCGGATCATGAAGATCGTTCGACTCCGGTTCCAATCCATATTGTCACCAGTGCATCTCAACTTCCAGTTGAATTCCTCGAACCCTCACCTCAAACGCAATTCGTCATTGGTTTCGATTGTGAGGGTGTCGACTTGTGTCGTTATGGGGCTCTCTGTATAATGCAGCTTGCATTTCCGGATGCTATATACCTGGTTGATGCAATCGAAGGTGGAGAGACGCTTATGAGAGCCTGCAAGCCTGCACTTGAGTCTAGTTACATAAAAAAAGTGATTCATGATTGTAAACGAGACAGTGAGGCATTGTATTTTCAATTTGGCATCAAGTTGAATAACGTGATGGATACCCAGATTGCTTATTCACTGATAGAGGAGCAAGAAGGACGGAAGAGATTGCCGGATGACTACATTTCATTTGTTGGCCTCCTTGCGGATCCATATTATTGTGGTATATCATATGATGAGAAAGAAGAAGTTCGCATCCTCCTTCGTCAGGACCCCAAGTATTGGACATACAGACCATTATCTGAACAAATGGTCCGTGCCGCTGCTGATGATGTTCGCTTTCTTCTTTACATTTATCATCGGATGATGGAGAAATTAAGTGAGCGGTCTCTATGGTATCTTGCAGTTCGTGGTGCTCTCTATTGCCGATGCTTTTGTGTCAATGACGATTATGCGGACTGGCCATCTCTGCCTCCTATTCCAGACGTGTTGACAGTGGACGGAGATGCTCCCGAGGAAGAAATCCTTTCAGTTCTTGATGTCCCCCAAGGAAAGATGGGACGCGTTATTGGGAGAAAAGGGGCGTCAATTTTGTCAATTAAGGAGTCCTGCGAGGCGCAAATTCTCATTGGCGGTGCGAAGGGCCCACCTGACAAGGTTTTTATCATGGGACCAGTGAAGCAGGTGAGGAAAGCGGAGGCCATGTTAAGGGGCAGAATGCTGGATGTGTACTGA 1029 0.4674 MASPPPSYQTDLPLPSDSQTGDKLPDHEDRSTPVPIHIVTSASQLPVEFLEPSPQTQFVIGFDCEGVDLCRYGALCIMQLAFPDAIYLVDAIEGGETLMRACKPALESSYIKKVIHDCKRDSEALYFQFGIKLNNVMDTQIAYSLIEEQEGRKRLPDDYISFVGLLADPYYCGISYDEKEEVRILLRQDPKYWTYRPLSEQMVRAAADDVRFLLYIYHRMMEKLSERSLWYLAVRGALYCRCFCVNDDYADWPSLPPIPDVLTVDGDAPEEEILSVLDVPQGKMGRVIGRKGASILSIKESCEAQILIGGAKGPPDKVFIMGPVKQVRKAEAMLRGRMLDVY 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0795 342 Gene3D - 2 239 IPR036397 GO:0003676
Lele26g0795 342 SUPERFAMILY Ribonuclease H-like 7 251 IPR012337 -
Lele26g0795 342 Pfam 3'-5' exonuclease 53 224 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lele26g0795 342 MobiDBLite consensus disorder prediction 1 32 - -
Lele26g0795 342 SMART kh_6 271 339 IPR004087 GO:0003676
Lele26g0795 342 CDD KH-I 277 334 - -
Lele26g0795 342 PANTHER EGALITARIAN, ISOFORM B 17 339 - -
Lele26g0795 342 CDD Egl_like_exo 49 244 - -
Lele26g0795 342 SMART 35exoneu6 36 225 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lele26g0795 342 Gene3D K Homology domain, type 1 263 338 IPR036612 GO:0003723
Lele26g0795 342 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 266 340 IPR036612 GO:0003723
Lele26g0795 342 Pfam KH domain 277 335 IPR004088 GO:0003723
Lele26g0795 342 ProSiteProfiles Type-1 KH domain profile. 272 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0795 Lele-ChrLele26 5044943 5049037 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0795 26 5044943 5049037 Lele27g1293 27 19702986 19707011 hybridization
Lele26g0795 26 5044943 5049037 Lele28g0782 28 4977797 4981782 hybridization