Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0691 ATGCAGAGATTGAAAGCTCTGCTATCGGAGACTAGGTGCTCATTCCGCAGCTTTCATCGGAGAGCCTTCTCTGCTCAACCAAACTATGTCGAGCATGATGACGCCCAAGACCAGATTTTAGTTGAAGGAAAAGCTATATCGAGAGCTGCTATTCTTAACAGACCAAATTCTCTTAATGCACTCACTACTTCGATGGTATCCCGACTGACGAGACTGTATACTTCATGGGAAGATAATCCTGCTATCGGCTTTGTTTTAATGAAGGCTAATGGCAGGGCTTTTTGTGCTGGTGGAGACGTTGTAAGGCTTTATCACTTATTAAATCAAGGAAATGCTGAAGAAGCTAAACAGTTTTTCAATACATTATATAAGTACGTATATCTTCAAGGAACCTATCTTAAGCCCCATGTTGCTATTTTGGATGGTATAACAATGGGATGTGGTGCTGGAATTTCGCTTCCAGGGATGTTTCGTGTGGTAACTGATAAAACTCTTTTTTCTAACCCAGAGGCTCAAATAGGTTTCCACCCTGATGCAGGAGCTTCCTTTTATCTCTCTCGTTTGCCTGGGTACTTGGGGGAATACCTTGCCCTTACAGGAGAGAAGCTTAATGGTGTGGAGATGATTGCCTGTGGCCTTGCTACTCACTACACACTAAATGCTAGGCTTGCTTTGCTTGAAGAACGCCTTGGTAAGCTGGTCTCAGATGATGCTTCTGTTGTAGAGTCATCCCTGGCACAGTATGGTGATCTTGTTTATCCAGACAGTAGGAGCATTCTTCGCAAGATTGATACAATTGATAGATGTTTTGGCCATGATACGGTTGAGGAAATTATTGATGCTCTGGAGAAGGAAGCCGCCGAGTCTTGTGATGAATGGTGTAAGACAACCCTTGAAAAGATAAGAGGGGCCTCTCCATTGAGTTTGAAAATTACTTTAAGATCTATACGTGAAGGGAGATTTGAAACTCTTGATAAGTGTCTTGTGCGTGAATATCGGGTATCACTTCGTGGAATTTCTCAGCAGGCCTCCTCGGACTTCCTCGAGGGTGCTCGAGCAAGACTGGTTGATAAAGATTTTGCACCTAAGTGGGACCCACCTAGCTTAAAAGAAGTATCAGAGGACATGGTTGAATGCTATTTCTCCCCATTAAATGAAGTTGAGTCTGAATTGGAATTGCCCACCAACTTGCGCGAACCTTACATGTGA 1209 0.4342 MQRLKALLSETRCSFRSFHRRAFSAQPNYVEHDDAQDQILVEGKAISRAAILNRPNSLNALTTSMVSRLTRLYTSWEDNPAIGFVLMKANGRAFCAGGDVVRLYHLLNQGNAEEAKQFFNTLYKYVYLQGTYLKPHVAILDGITMGCGAGISLPGMFRVVTDKTLFSNPEAQIGFHPDAGASFYLSRLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNARLALLEERLGKLVSDDASVVESSLAQYGDLVYPDSRSILRKIDTIDRCFGHDTVEEIIDALEKEAAESCDEWCKTTLEKIRGASPLSLKITLRSIREGRFETLDKCLVREYRVSLRGISQQASSDFLEGARARLVDKDFAPKWDPPSLKEVSEDMVECYFSPLNEVESELELPTNLREPYM 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0691 402 SUPERFAMILY ClpP/crotonase 51 367 IPR029045 -
Lele26g0691 402 Gene3D - 33 398 - -
Lele26g0691 402 CDD crotonase-like 52 216 - -
Lele26g0691 402 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 33 397 - -
Lele26g0691 402 Pfam Enoyl-CoA hydratase/isomerase 49 381 IPR045004 -
Lele26g0691 402 Coils Coil 272 292 - -
Lele26g0691 402 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 34 396 IPR032259 GO:0003860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0691 Lele-ChrLele26 4422898 4427179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0691 1 402 Acyl Lipid Metabolism Gene Families AT4G31810 69.682 0.0 593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0691 26 4422898 4427179 Lele27g1404 27 20338369 20342496 hybridization
Lele26g0691 26 4422898 4427179 Lele28g0676 28 4335055 4339336 hybridization