Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1404 ATGCAGAGATTGAAAGCTCTGCTACCGGAGACTAGGTGCTCATTCCGCAGCTTTCATCGGAGAGCCTTCTCTGCTCAACCAAACTACGTCGAGCATGATGACCCCCAAGACCAGATTTTATTTGATGGAAAAGCTATATCGAGAGCTGCTATTCTTAACAGACCAAATTCTCTTAATGCACTCACTACTTCGATGGTTAGGCCTTTCTTCTTTTCTTCCAGCTACTCGTCCATTCGATGTTTTAATACGTACATCTTCAGTAATGTTGTAAATAGAGTGCTAAGGGGAAACAGCCATTGTGCTAATGGCAGGGCTTTTTGTGCTGGTGGAGACGTTGTAAGGCTTTATCACTTATTAAATCAAGGAACTGCTGAAGAAGCTAAGCGGTTTTTCAATACATTATATAAGTACGTATATCTTCAAGGAACCTATCTTAAGCCCCATGTTGCTATTTTGGATGGTATAACAATGGGATGTGGTGCTGGAATTTCACTTCCAGGGATGTTTCGTGTGGTAACTGATAAAACTCTTTTTTCTAACCCAGAGGCTCAAATGGGTTTCCACCCTGATGCAGGAGCTTCCTTTTATCTCTCTCGTTTGCCTGGATACTTGGGGGAATACGTGGCCCTTACAGGAGAGAAGCTTAATGGTGTAGAGATGATTGCCTGTGGCCTTGCTACTCACTATACACTAAATGCTAGGCTTGCTTTGCTTGAAGAACGCCTTGGCAAGCTGGTCTCAGATGATGCTTCTGTTGTAGAGTCATCTCTGGCACAGTATGGTGATCTTGTTTATCCAGACAGTAGGAGCATTCTTCGCAAGATCGATACAATTGATAGATGTTTCGGCCATGATACGGTTGAGGAAATTATTGATGCTCTGGAGAAGGAAGCCGCTGAGTCTTGTGATGACTGGTGTAAGACAGCCCTTGAAAAGATAAGAGGCGCCTCTCCATTGAGTTTGAAAATTACTTTAAGATCTATTCGCGAAGGTAGATTTGAAACTCTTGATAAGTGTCTTGTTCGTGAATATCGGATATCACTTCGTGGAATTTCTCAGCAGGTCTCCTCTGACTTCCTCGAGGTTGCTCGAGCAAGACTGGTTGATAAAGATTTTGCACCTAAGTGGGACCCACCTAGCTTAAAAGAAGTATCAGAGGACATGGTTGAATGCTATTTCTCCTCATTAAATGAAGTTGAGTCTGAATTGGAATTGCCCACCAACTTGCACGAACCTTACATGTGA 1245 0.4297 MQRLKALLPETRCSFRSFHRRAFSAQPNYVEHDDPQDQILFDGKAISRAAILNRPNSLNALTTSMVRPFFFSSSYSSIRCFNTYIFSNVVNRVLRGNSHCANGRAFCAGGDVVRLYHLLNQGTAEEAKRFFNTLYKYVYLQGTYLKPHVAILDGITMGCGAGISLPGMFRVVTDKTLFSNPEAQMGFHPDAGASFYLSRLPGYLGEYVALTGEKLNGVEMIACGLATHYTLNARLALLEERLGKLVSDDASVVESSLAQYGDLVYPDSRSILRKIDTIDRCFGHDTVEEIIDALEKEAAESCDDWCKTALEKIRGASPLSLKITLRSIREGRFETLDKCLVREYRISLRGISQQVSSDFLEVARARLVDKDFAPKWDPPSLKEVSEDMVECYFSSLNEVESELELPTNLHEPYM 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1404 414 CDD crotonase-like 52 228 - -
Lele27g1404 414 SUPERFAMILY ClpP/crotonase 51 379 IPR029045 -
Lele27g1404 414 Pfam Enoyl-CoA hydratase/isomerase 49 393 IPR045004 -
Lele27g1404 414 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 36 408 IPR032259 GO:0003860
Lele27g1404 414 Gene3D - 33 410 - -
Lele27g1404 414 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 33 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1404 Lele-ChrLele27 20338369 20342496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1404 1 413 Acyl Lipid Metabolism Gene Families AT4G31810 62.857 0.0 526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0687 25 4340345 4345017 Lele27g1404 27 20338369 20342496 hybridization
Lele26g0691 26 4422898 4427179 Lele27g1404 27 20338369 20342496 hybridization