Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0369 ATGCACTTCTTGCTCGAGCATGGTCACCTGGATGGAGCAATGCTTACAAGGCTTGCCTTGACTACATTCATAAATGGCCCATTGCTTGAGCATTCAAAAAATCGCAGGAAAGCTGACAGTGCCACAACCTCATTTCTCTCCCCACATTTGCACTTTGGAGAGTTGAGTGTGAAAAAGGTCTTCCATCTGGTGCGAATTAAGCAAGTTTTATGGGCCAATGAAGGGAACAAGGCTGGCGAAGAAAGTGTCAACCTGTTTCTCAAGTCTATTGGTCTGAGAGAGTATTCAAGGCATGGAGGCAAGGAAGAACTGGGTACCCCCTTGGTGGATGCTGGGATGAGAGAGTTGTGGGCCACTGGTTGGCTGCATGATCGGATACATGTTGTCGTTTCTAGTTTCTTTTTGAAGGTTCTACAGCTTCCCTGGAGATGGGGAATGAAATATTTTTGGGATACGCTCCTGGATGCAGATCTTGAGAGCGACTCTCTTGGTTGGAAGTACATATCAGGTACAATCCCTGATGGCCGTGAATTTGACCGAAAGATAGCCCACAGCCTTTCATATTGGTACAATTATCTTTTTCCTATTGTGGGAATAGATGCAGCAAAAACCCGATTGGAAGAAGCACTATTACAAATGTGGCAACAAGAAGCAGCTTCAAGAGCCGCAATTGAAAATGGAACTGAGGAAGGGCTTGGAGACTCCTCTGAATCGGCCCCTATTGCATTTCCTCGGGACATAAAAATGGAGGAAAGTCATGATCCTGTTAGGAACAACCCCCTTTCTGTTGCCCGGTCCTATGAGGATCAGATGGTCCCAAGCATCACTTCCCAATTGAGGGTGAAAGACGAAGAAGCTTCTTCAGATCTTCGAAACTCAACAGGGGATAGCAGAGCTGAAGTGCCAATTAATATGGGATCAGAATCTCCTTTTGGATTTCAAGAACTGCCTAATGCAAGGAAATTGGCACTTGGAAGTTGGAACAGCCTCAAGCTCATTAATGTGTTGAAGATTCGTAGAGCACCGAAAGACGATCGTAGTGTGACAGCGGAGAAATTGGTTGATAAAACCTCAAAATCAGGCGGTTCAATCTTCAATGCAACTGTTAAAACTCCATCAATACCACCCCAAGGTTGCGAGGTGATAAATCTGTTGTTTATGGAAATGGCTGGTGGGGGATGTAGCATAGTGTGGTTCAGAAGAGATCTGAGGTTGGAGGATAATTCGGCACTGGCGGCGGGAATGAGAGCAGGAGCTGTGGTGGCAGTTTTTATATGGGCGCCTGAAGAAGAGGGTCAATACCAGCCGGGAAGGGTTTCTAGGTGGTGGCTCAGACAAAGTTTGTCTCTTCTTGATTCTTCTTTGCGTAATCTTGGCATTTCTCTTGTCACCAAGCGATCCACTGATAGTGTTTCTTCTCTCCTGGAGGTTATCAATTCCACTGGAGCCTCGCAACTCCTTTTTAACCACTTATATGATCCCCTGTCACTTATCAGGGATCGCCGGGCGAAGGAGGTGCTGACTGCTCAAGGCATAGCCGTACGTTCCTTTAATGCAGATTTACTGTATGAACCATGGGATGTGAATGATGCACATGGCCAGCCATTCACAACTTTTTCTGCTTTTTGGGGAAGATGCCTCAGCATGCCTTATGACCCAGAGGCACCTCTTCTCCCTCCTGGAAGAATTGTTGCAGGTGATGTATCGAGGTTCTCTTCTGATACACTAGTGTTTGAAGATGAATCAGAGAAGGCAAGCAATGCACTTCTTGCCCGAGCATGGTCACCTGGATGGAGCAATGCCGACAAGGCTTTAACCACATTCATAAATGGTCCATTGATTGAGTACTCAAAAAATCGCAGGAAAGCTGACAGTGCCACAACCTCATTTCTTTCCCCACATTTGCACTTTGGAGAGGTGAGTGTGAAAAAGGTCTTCCATCTGGTCCGGATTAAGCAAGTTTTATGGAAAAATGAAGGGAACAAGGCTGGTGAAGAAAGTGTCAACCTGTTTCTCAAGTCTATTGGTCTGAGAGAGTATTCAAGGTACATCAGTTTCAACCATTCCTATAGCCATGAAAGGCCTCTTCTAGGCCATCTCAGGTTCTTCCCATGGGTCGTAAATGAAAGCTACTTTAAAGCATGGAGACAAGGACGAACTGGGTACCCCTTAGTGGATGCTGGGATGAGAGAGTTGTGGGCTACTGGTTGGCTGCATGATCGAATACGTGTTGTTGTTTCCAGTTTCTTTGTGAAGGTTCTGCAACTTCCCTGGAGATGGGGAATGAAGTATTTCTGGGACACTCTCTTAGATGCAGATCTTGAGAGTGATGCTCTTGGTTGGCAGTACATATCTGGTTCTCTCCCTGATGGCCGTCCATTTGACCAAATAGATAACCCACAGTTTCAGGGATACAAGTTTGATCCAAATGGAGAATATGTACGACGTTGGCTTCCAGAACTTGCCAGAATACCCACCGAATGGATTCATCACCCATGGAACGCACCAGAACCCATGCTACAAGCTGCTGGAATTGAACTGGGGTCAAATTACCCTCTTCCTATTGTTGGAATAGATGCTGCAAAAGCCAGATTGGAAGAAGCAATAACAGTAATGTGGCAACAAGAAGCAGCTTCAAGAGCCGCCATTGAAAATGGAACTGAAGAAGGACTTGGAGACTCCTTTGAAACAACCCCTATTACCTTTCCTCAAGACATACAAGTGGAGGAAAGTCGTGAACCTGTTAGACACATGCCCCCTCCTATTGCTCGCCCCTACCAGGATCAGATGGTCCCAAGCATCACTTCCTCCCTTTCGAGAGTGGAAGATGAAGAAACTTCTTCAGATCTTCGAAACACGACAGTAGATAGCAGGGCTGAAGTGCCAATCAACGTAAATGTACATCAAAATGCAAGGGCAAGAGAAACATTGAACCAACGGATGTTGCAGGCTGTTCAAGGAAATAGCCAAGTACAGAATACCGCCTTGGAACTGAGAAATGCAGCTGAAGATTCGACAGCAGAATCTTCAAGTAATAGTAGGAGAGGAAGGGACGGAGGTGTAGTTCCAGTATGGTCTCCTTAA 3084 0.4591 MHFLLEHGHLDGAMLTRLALTTFINGPLLEHSKNRRKADSATTSFLSPHLHFGELSVKKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRHGGKEELGTPLVDAGMRELWATGWLHDRIHVVVSSFFLKVLQLPWRWGMKYFWDTLLDADLESDSLGWKYISGTIPDGREFDRKIAHSLSYWYNYLFPIVGIDAAKTRLEEALLQMWQQEAASRAAIENGTEEGLGDSSESAPIAFPRDIKMEESHDPVRNNPLSVARSYEDQMVPSITSQLRVKDEEASSDLRNSTGDSRAEVPINMGSESPFGFQELPNARKLALGSWNSLKLINVLKIRRAPKDDRSVTAEKLVDKTSKSGGSIFNATVKTPSIPPQGCEVINLLFMEMAGGGCSIVWFRRDLRLEDNSALAAGMRAGAVVAVFIWAPEEEGQYQPGRVSRWWLRQSLSLLDSSLRNLGISLVTKRSTDSVSSLLEVINSTGASQLLFNHLYDPLSLIRDRRAKEVLTAQGIAVRSFNADLLYEPWDVNDAHGQPFTTFSAFWGRCLSMPYDPEAPLLPPGRIVAGDVSRFSSDTLVFEDESEKASNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVKKVFHLVRIKQVLWKNEGNKAGEESVNLFLKSIGLREYSRYISFNHSYSHERPLLGHLRFFPWVVNESYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRPFDQIDNPQFQGYKFDPNGEYVRRWLPELARIPTEWIHHPWNAPEPMLQAAGIELGSNYPLPIVGIDAAKARLEEAITVMWQQEAASRAAIENGTEEGLGDSFETTPITFPQDIQVEESREPVRHMPPPIARPYQDQMVPSITSSLSRVEDEETSSDLRNTTVDSRAEVPINVNVHQNARARETLNQRMLQAVQGNSQVQNTALELRNAAEDSTAESSSNSRRGRDGGVVPVWSP 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0369 1027 MobiDBLite consensus disorder prediction 1001 1027 - -
Lele26g0369 1027 Pfam DNA photolyase 395 550 IPR006050 -
Lele26g0369 1027 Gene3D HUPs 396 594 IPR014729 -
Lele26g0369 1027 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 395 563 IPR036155 -
Lele26g0369 1027 FunFam Deoxyribodipyrimidine photo-lyase 689 878 - -
Lele26g0369 1027 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 582 876 IPR036134 -
Lele26g0369 1027 Pfam FAD binding domain of DNA photolyase 671 868 IPR005101 -
Lele26g0369 1027 Pfam FAD binding domain of DNA photolyase 105 178 IPR005101 -
Lele26g0369 1027 TIGRFAM crypt_chrom_pln: cryptochrome, plant family 394 869 IPR014134 GO:0009785|GO:0009882
Lele26g0369 1027 MobiDBLite consensus disorder prediction 276 303 - -
Lele26g0369 1027 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 103 186 - -
Lele26g0369 1027 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 689 890 - -
Lele26g0369 1027 MobiDBLite consensus disorder prediction 248 267 - -
Lele26g0369 1027 PRINTS DNA photolyase signature 779 793 IPR002081 -
Lele26g0369 1027 PRINTS DNA photolyase signature 720 736 IPR002081 -
Lele26g0369 1027 PRINTS DNA photolyase signature 740 758 IPR002081 -
Lele26g0369 1027 MobiDBLite consensus disorder prediction 1001 1016 - -
Lele26g0369 1027 Gene3D - 522 681 - -
Lele26g0369 1027 ProSitePatterns DNA photolyases class 1 signature 1. 720 732 IPR018394 -
Lele26g0369 1027 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 19 217 IPR036134 -
Lele26g0369 1027 Gene3D - 11 99 - -
Lele26g0369 1027 PANTHER CRYPTOCHROME 394 878 IPR002081 -
Lele26g0369 1027 ProSitePatterns DNA photolyases class 1 signature 2. 740 759 IPR018394 -
Lele26g0369 1027 Pfam Blue/Ultraviolet sensing protein C terminal 899 1013 IPR020978 -
Lele26g0369 1027 Pfam Blue/Ultraviolet sensing protein C terminal 239 308 IPR020978 -
Lele26g0369 1027 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 393 522 IPR006050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0369 Lele-ChrLele26 2232319 2242901 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0369 26 2232319 2242901 Lele27g1730 27 22591199 22594919 hybridization
Lele26g0369 26 2232319 2242901 Lele28g0368 28 2247189 2255751 hybridization