Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0313 ATGCCTCCTCCGCCCCCCGCCTCCTCTGTTGTTTTATCCGATTCTATATCCCGCCCCACCAACCATGGTCATAGTAATTACAGCAACAGTGACTGTGGACGACTGAGTCAGCGAGAGCAGAACCAGCCTGCGGTGGACGTGAAGATTAACGACTTGGTTGGGAACGGAATCTCGGGGATACTTTACAAGTGGGTCAATTACGGCAAAGGTTGGAGGCCTCGATGGTTCGTGCTTCAGGATGGCGTTCTCTCGTACTATAAGATTCACGGGCCCGATAAGATCATAGTCAATCATGAAACCGAGAAGCGGTCCAAGGTTATTGGCGAGGAATCCATGCGAAGGATCTCCCGCAATAAGAACTCCACTTCCCATCATCAGCGCTTCAACCATCGACGCAAGGCCTTTGGAGAAATTCATCTCAAGGTCTCTACTATTCGTGAAAGCAAATCCGATGACAAGCGCTTTTCTATTTTCACTGGAACAAAGAGGCTTCACTTGAGGGCGGAAACTCGTGAAGATCGAGTGGCATGGACGGAGGCCCTGCAGGCAGTAAAAGATATGTTCCCCCGGATGTCCAATAGCGACCTGATGGCTCCGCTAGATAATGTAACCATTTCAATTGAACAACTTAGACAGAGACTACTGGAAGAAGATGTGAGTGAGGCAGCTATTCAGGATAGCGAGCAAATTATGAGAAACGAGTTTGCAGCACTGCAAACCCAGCTTGTGTTGCTTAAGCAGAAGCAGTGGATTCTGATTGATACATTGCGACAACTGGAGGCTATCGGGAAACTTGGAATATGTTGTTATGGTAGAACTGGTGAAGAGCAGGATGGTTTCTTTTTGAATTCTCCATCTCTTCAGACAGAAAAGGTTGATTTGGAGAATACAGTTGTTGATGAGAGCCAAAGACAGTTGAATGATCAAGAGGAGGCCTCTAGAGTAAGGCAGGAAAAGTTCAGTGAAAGAAGTGCAAGTGAATCTGAGGATGATAATGATAGAAATGATGCTGCAGAAGAAGAAACAGATGATGATGACCATGCCTTTTTTGACACCCGCGACTTTCTATCATCCAGCTCTTTTAAAAGTAACGGGTCTGATTTTAGGGTATCATCTTTCTCTTCAGGAGATGATGGGTTATACACAGTTGAATCAGAGGACGAGTTAGATCCTTTGGTTAGATCTGTTGCACCCAACTATCCTTATGTTAAGCGGCGTAAGGAGTTGCCTGAACCTATTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAACATTGGCAAGGATTTAACAAAAGTATGTCTGCCTGTCTACTTTAATGAGCCTATATCGTCTCTGCAAAAATGTTTTGAAGAAATGGAGTATTCATATCTTCTGGATTGTGCATATGAATGGGGAAGAAGGGGAAATAGCCTTTTGAGGATTCTATATGTTGCTGCCTTTGCTGTTTCTGGCTATGCTTCAACTGAAGGGAGGATTTGCAAACCATTTAATCCATTATTAGGTGAAACTTATGAGGCTGATTTTCCGGATAAAGGCCTCCGATTTTTCTCAGAGAAGGTCAGTCATCATCCCATGATTGTTGCATGTCACTGTGAGGGTACAGGGTGGAAATTTTGGGGGGATAGCAACTTAAAAAGCAAATTTTGGGGCCGATCAATTCAGCTTGATCCAGTTGGAATCTTGACTTTGGAATTCGATGATGGGGAAGTTTTTCAGTGGAGGAAGGTTACAACATCAATATACAATCTCATATTGGGAAAGCTGTACTGTGATCACTATGGGACGATGCGTATACAGGGAAACCAAGAATACTCATGTAAACTGAAATTCAAGGAACAATCTATAATAGATCGAAATCCTCGCCAGGTGCAGGGTCTTGTTCAAGACAGGAAAGGGAAGACAGTGGCGACTTTATTTGGAAAGTGGGATGAAAGCATATATTATGTCAATGGAGATTGCATTGGGAAGGGGAAAGGTTATGACTCTTCATCAGAAGCTCATCTACTATGGAAACGAAGCAAGCCTTCCAAATTTCTAACTAGATATAACTTTACTCGCTTTGCCATCACATTAAATGAACTTACCCCTGGATTGAAGGATAAGTTGCCACCTACAGATTCCAGGTTAAGACCAGACCAAAGGTATTTGGAAAATGGGGAGTTTGAGATGGCAAATTCTGAGAAGTTACGACTAGAACAGCGGCAACGCCAGGCACGAAAAATGCAAGAAAGGGGATGGAAACCGCGATGGTTCGCCATGGATAATGCAAGTGGTACATACCGCTACTTGGGAGGGTATTGGGAGGCGAGGGAACGAGGAAGCTGGGACTCCTGTCCTGATATTTTTTGCCAAATCCCCTCCGATCATCTTTTTGACTGA 2391 0.44 MPPPPPASSVVLSDSISRPTNHGHSNYSNSDCGRLSQREQNQPAVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVNHETEKRSKVIGEESMRRISRNKNSTSHHQRFNHRRKAFGEIHLKVSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWTEALQAVKDMFPRMSNSDLMAPLDNVTISIEQLRQRLLEEDVSEAAIQDSEQIMRNEFAALQTQLVLLKQKQWILIDTLRQLEAIGKLGICCYGRTGEEQDGFFLNSPSLQTEKVDLENTVVDESQRQLNDQEEASRVRQEKFSERSASESEDDNDRNDAAEEETDDDDHAFFDTRDFLSSSSFKSNGSDFRVSSFSSGDDGLYTVESEDELDPLVRSVAPNYPYVKRRKELPEPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPISSLQKCFEEMEYSYLLDCAYEWGRRGNSLLRILYVAAFAVSGYASTEGRICKPFNPLLGETYEADFPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWRKVTTSIYNLILGKLYCDHYGTMRIQGNQEYSCKLKFKEQSIIDRNPRQVQGLVQDRKGKTVATLFGKWDESIYYVNGDCIGKGKGYDSSSEAHLLWKRSKPSKFLTRYNFTRFAITLNELTPGLKDKLPPTDSRLRPDQRYLENGEFEMANSEKLRLEQRQRQARKMQERGWKPRWFAMDNASGTYRYLGGYWEARERGSWDSCPDIFCQIPSDHLFD 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0313 796 MobiDBLite consensus disorder prediction 301 349 - -
Lele26g0313 796 Gene3D - 717 776 - -
Lele26g0313 796 ProSiteProfiles PH domain profile. 54 186 IPR001849 -
Lele26g0313 796 MobiDBLite consensus disorder prediction 332 347 - -
Lele26g0313 796 Gene3D - 55 188 IPR011993 -
Lele26g0313 796 MobiDBLite consensus disorder prediction 10 39 - -
Lele26g0313 796 MobiDBLite consensus disorder prediction 301 331 - -
Lele26g0313 796 Pfam Oxysterol-binding protein 420 775 IPR000648 GO:0008289
Lele26g0313 796 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 56 774 IPR000648 GO:0008289
Lele26g0313 796 Gene3D - 506 679 - -
Lele26g0313 796 SUPERFAMILY Oxysterol-binding protein-like 415 787 IPR037239 -
Lele26g0313 796 FunFam Oxysterol-binding protein-related protein 2A 717 788 - -
Lele26g0313 796 Pfam Pleckstrin homology domain 62 182 - -
Lele26g0313 796 Coils Coil 728 748 - -
Lele26g0313 796 MobiDBLite consensus disorder prediction 1 39 - -
Lele26g0313 796 SUPERFAMILY PH domain-like 57 186 - -
Lele26g0313 796 CDD PH_ORP_plant 57 193 - -
Lele26g0313 796 FunFam oxysterol-binding protein-related protein 1D isoform X1 506 678 - -
Lele26g0313 796 SMART PH_update 55 188 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0313 Lele-ChrLele26 1849041 1854339 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0313 26 1849041 1854339 Lele27g1784 27 22930623 22935879 hybridization
Lele26g0313 26 1849041 1854339 Lele28g0316 28 1881245 1886486 hybridization