Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1784 ATGCCTCCTCCGCCCCCCGCCTCCGCCGCCATTAGATCTGATTCTATTTCCCGCCCCACCAACCACGGTCATAGTAATTGCAGCAACACTGACTGTGGACGGCTGAGTCAGCGAGAGCAGCACCAGCCTGCGGTGGACGTGAAGATTAACGACTTGGTTGGGAACGGAATATCGGGGATACTTCACAAGTGGGTCAATTACGGCAAAGGTTGGAGGCCGCGATGGTTCGTGCTTCAGGACGGTGTTCTCTCGTACTATAAGATTCACGGGCCCGATAAGATCATAGTCAATCATGAAACCGAGAAGTGGTCCAAGGTTATTGGCGAAGAATCCATGCGAAGGATCTCCCGCAACAAGAACTCCACTTCCCATCATCAGCACTTCAACCATCGACGCAAGCCCTTTGGAGAAATCCATCTCAAGGTCTCTACTATTCGTGAAAGCAAATCCGATGACAAGCGCTTTTCTATTTTTACTGGAACAAAGAGGCTTCACTTGAGGGCGGAAACTCGTGAAGATCGAGTGGCATGGATGGAGGCCCTGCAGGCAGTAAAAGATATGTTCCCCCGGATGTCCAATAGCGAGCTGATGGCTCCGTTAGATAATGTAACCATTTCAACTGAAAAGCTTAGACAGAGACTACTGGAAGAAGATGTGAGTGAGGCAGCTATTCAGGATAGCGAGCAAATTATGAGAAACGAGTTTGCAGCGCTGCAAACCCAGCTTGTGTTGCTTAAGCAGAAGCAATGGATTCTGATTGATACATTGCGACATCTGGAGACAGAAAAGGTTGATTTGGAGAATACGGTTGTTGATGAGAGCCAAAGACAGTTGAATGATCAAGAGGAGTCCTCTAGAGTAAGGCAGGAAAAGTTCAGTGAAGGAAGTGCAAGTGAATCTGAGGATGATAATGATAGAAATGATGCTGCAGAAGAAGAAACAGATGATGATGACAATGCTTTTTTTGACACCCGTGACTTTCTATCATCTAGCTCTTTTAAAAGTAACGGGTCTGATTTTAGGGCATCATCTTTTTCTTCAGGAGATGACGGGTTATACACAGTTGAATCAGAGGACGAGTTAGACCCTTTGATTAGATCTGTTGCACCCAACTATCCTTATGTTAAGAGGCGTAAGAAGTTGCCTGATCCTATTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAACATTGGCAAGGATTTAACAAAAGTATGTCTGCCTGTCTACTTTAATGAGCCTGTATCGTCTCTGCAAAAATGTTTTGAAGAAATGGAGTATTCATATCTTCTGGATTGTGCATATGAATGGGGAAGAAGGGGAAATAGCCTTTTGAGGATTCTATATGTTGCTGCCTTTGCTATTTCTGGCTATGCTTCAACTGAAGGGAGGACTTGCAAACCATTTAATCCATTATTAGGTGAAACATATGAGGCTGATTTTCCGGATAAAGGCCTCCGATTTTTCTCAGAGAAGGTCAGTCACCATCCCATGATAGTTGCATGTCACTGTGAGGGTACAGGGTGGAAATTTTGGGGGGATAGCAACTTAAAAAGCAAATTTTGGGGCCGATCAATTCAGCTTGACCCAGTTGGGATCTTGACTTTGGAATTTGATGATGGGGAAGTTTTTCAGTGGAGTAAGGTTACAACATCAATATACAATCTCATATTGGGTAAGCTGTACTGTGATCACTATGGGACAATGCGTATACAGGGAAACCAAGAATACTCATGTAAACTGAAATTCAAGGAACAATCTATAATAGATCGAAATCCTCACCAGGTGCAGGGTATTGTTCAAGACAGGAAAGGGAAGACAGTGGCGACTTTATTTGGAAAGTGGGATGAGAGCATGTATTATGTCAATGGAGATTGCATCGGGAAGGGGAAAGGTTATGACTCTTCATCAGAAGCTCATCTACTATGGAAACGAAGCAAGCCTCCCAAATTTCCAACTAGATATAACCTTACTCGTTTTGCCATCACATCAAATGAACTTACACCTGGATTGAAGGAGAAGTTGCCACCTACAGATTCCAGGTTAAGACCAGACCAAAGGTATTTGGAAAATGGTGAGTTTGAGATGGCAAATTCTGAGAAGTTACGACTAGAACAGCGGCAACGCCAGGCACGAAAAATGCAAGAAAGGGGATGGAAACCGCGATGGTTCGCCATGGATAAAGCAAGTGGTACATACCGCTACTTGGGAGGGTATTGGGAGGCCAGGGAACGAGGAAGCTGGGACACCTGCCCTGATATTTTTGACCAAATCCCCTCCGATCATCTTTCTGACTGA 2307 0.4443 MPPPPPASAAIRSDSISRPTNHGHSNCSNTDCGRLSQREQHQPAVDVKINDLVGNGISGILHKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVNHETEKWSKVIGEESMRRISRNKNSTSHHQHFNHRRKPFGEIHLKVSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPLDNVTISTEKLRQRLLEEDVSEAAIQDSEQIMRNEFAALQTQLVLLKQKQWILIDTLRHLETEKVDLENTVVDESQRQLNDQEESSRVRQEKFSEGSASESEDDNDRNDAAEEETDDDDNAFFDTRDFLSSSSFKSNGSDFRASSFSSGDDGLYTVESEDELDPLIRSVAPNYPYVKRRKKLPDPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPVSSLQKCFEEMEYSYLLDCAYEWGRRGNSLLRILYVAAFAISGYASTEGRTCKPFNPLLGETYEADFPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQEYSCKLKFKEQSIIDRNPHQVQGIVQDRKGKTVATLFGKWDESMYYVNGDCIGKGKGYDSSSEAHLLWKRSKPPKFPTRYNLTRFAITSNELTPGLKEKLPPTDSRLRPDQRYLENGEFEMANSEKLRLEQRQRQARKMQERGWKPRWFAMDKASGTYRYLGGYWEARERGSWDTCPDIFDQIPSDHLSD 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1784 768 SUPERFAMILY PH domain-like 57 186 - -
Lele27g1784 768 Pfam Oxysterol-binding protein 392 747 IPR000648 GO:0008289
Lele27g1784 768 Gene3D - 478 656 - -
Lele27g1784 768 MobiDBLite consensus disorder prediction 13 37 - -
Lele27g1784 768 Pfam Pleckstrin homology domain 62 182 - -
Lele27g1784 768 SMART PH_update 55 188 IPR001849 -
Lele27g1784 768 Coils Coil 700 720 - -
Lele27g1784 768 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 56 746 IPR000648 GO:0008289
Lele27g1784 768 FunFam Oxysterol-binding protein-related protein 2A 689 760 - -
Lele27g1784 768 MobiDBLite consensus disorder prediction 274 321 - -
Lele27g1784 768 MobiDBLite consensus disorder prediction 1 39 - -
Lele27g1784 768 Gene3D - 55 188 IPR011993 -
Lele27g1784 768 CDD PH_ORP_plant 57 193 - -
Lele27g1784 768 MobiDBLite consensus disorder prediction 304 320 - -
Lele27g1784 768 ProSiteProfiles PH domain profile. 54 186 IPR001849 -
Lele27g1784 768 Gene3D - 689 749 - -
Lele27g1784 768 Coils Coil 256 276 - -
Lele27g1784 768 SUPERFAMILY Oxysterol-binding protein-like 387 764 IPR037239 -
Lele27g1784 768 MobiDBLite consensus disorder prediction 274 303 - -
Lele27g1784 768 FunFam oxysterol-binding protein-related protein 1D isoform X1 478 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1784 Lele-ChrLele27 22930623 22935879 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0302 25 1807647 1812918 Lele27g1784 27 22930623 22935879 hybridization
Lele26g0313 26 1849041 1854339 Lele27g1784 27 22930623 22935879 hybridization