Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0316 ATGCCTCCTGTCGTTAGATCCGATTCTATTTCCCGCCCCACCAACCATGGTCATAGTAATTACAGCAACAGTGACTGTGGACGGCTGAGTCAGTTAGAGCAGCACCAGCCTGCGGTCGACGTGAAGATTAACGACTTGGTTGGGAACGGAATCTCGGGGATACTTTACAAGTGGGTCAATTACGGCAAAGGTTGGAGGCCTCGATGGTTCGTGCTTCATGATGGTGTTCTCTCGTACTATAAGATTCACGGGCCCCATAAGATCATAGTCAATCATGAAACCGAGAAGTGGTCCAAGGTTATTGGCGAAGAATCCATGCGAAGGATCTCCTACAATAAGAACTCCACTTCCCACCATCAGCACTTCAACCATCGACGCAGGCCCTTTGGAGAAATCCATCTCAAGGTCTCTACTATTCGTGAAAGCAAATCCGATGACAAGCGCTTTTCTCTTTTTACTGGAACAAAGAGGCTTCACTTGAGGGCGGAAACTCGTGAAGATCGAGTGGCATGGGTGGAGGCCCTGCAGGCAGTAAAAGATATGTTCCCCCGGATGTCCAATAGCGAGCTGATGGCTCCGTTAGATAATGTAACCATTTCAATTGAACAACTTAGACAGAGACTACTGGAAGAAGATGTGAGTGAGGCAGCTATTCAGGATAGCCAGCAAATTATGAGAAACGAGTTTTCAGCACTGCAAACCCAGCTTGTGTTGCTTAAGCAGAAGCAGTGGATTCTAACTGATACATTGCGACAACTCGAGGATTCTGGTCATGCTTACTATTCTCTATTTATCAGTAAAATGGTGGAAAAGGTTGATTTGGAGAATACAGTTGTTGATGAGAGCCAAAGACAGTATAATGATCAAGAGGAGTCCTCTAGAGTAAGGCAGGAAAAGTTCTGTGAAGGAAGTGCAAGTGAATCTGAGGATGATAATGATAGAAATGATGCTGCAGAAGAAGAAACAGATGATGATGACCATGCCTTTTTTGACACCCGCGACTTTCTATCATCCAGCTCTTTTAAAAGTAACGGGTCTGATCTTAGGGTATCATCTTTCTCTTCAGGAGATGATGGATTATACATAGTTGAATCAGAGGACGAGTTAGATCCTTTGGTTAGATCTGTTGCACCCAACTATCCTTATGTTAAGCGGCGTAAGAAGTTGCCTGAACCTATTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAACATTGGCAAGGATTTAACAAAAGTATGTCTGCCTGTGTACTTTAATGAGCCTATATCGTCTGTGCAAAAATGTTTTGAAGAAATGGAGTATTCATATCTTCTGGATTGTGCATATGAATGGGGAAGAAGGGGAAATAGCCTTTTGAGGATTCTATATGTTGCTGCCTTTGCTGTTTCTGGCTATGCTTCAACTGAAGGGAGGATTTGCAAACCATTTAATCCATTATTAGGTGAAACATATGAGGCTGATTTTCCGGATAAAGGTCTCCGATTTTTCTCAGAGAAGGTCAGTCATCATCCCATGATTGTTGCATGTCACTGTGAGGGTAAGGGGTGGAAATTTTGGGGAGATAGCAACTTAAAAAGCAAATTTTGGGGCCGATCAATTCAGCTTGATCCAGTTGGAATCTTGACTTTGGAATTCGATGATGGGGAAGTTTTTAAGTGGAGTAAGGTTACAACATCAATATACAATCTCATATTGGGAAAGCTGTACTGTGATCACTATGGGACAATGCGTATACAGGGAAACCAAGAATACTCATGTAAACTGAAATTCAAGGAGCAATCTATAATAGATCGAAATCCTCACCAGGTGCAGGGTATTGTTCAAGACAGGAAAGGGAAGACAGTGGCGACTTTATTTGGAAAGTGGGATGAAAGCATGTATTATGTCAATGGAGATTGCGTTGGGAAGGGGAAAGGTTATGACTCTTCATCAGAAGCTCATCTACTATGGAAACGAAGCAAGCCTTCCAAATTTCTAACTAGATATAACTTTACTCGCTTTGCCATCACATTAAATGAACTTACCCCTGGATTGAAGGAGAAGTTACCACCTACAGATTCCAGGTTAAGACCAGACCAAAGGTATTTGGAAAATGGGGAGTTTGAGATGGCAAATTCTGAGAAGTTACGACTAGAACAGCGGCAACGCCAGGCACGAAAAATGCAAGAAAGGGGATGGAAACCGCGATGGTTCGCCATGGACAAAGCAAGTGGTACATACCGCTACTTGGGAGGGTATTGGGAGGCCAGGGAACGAGGAAGCTGGGACTCCTGCCCTGATATTTTTGGCCAAATCCCCTCCGATCATCTTTCTGACTGA 2331 0.4333 MPPVVRSDSISRPTNHGHSNYSNSDCGRLSQLEQHQPAVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLHDGVLSYYKIHGPHKIIVNHETEKWSKVIGEESMRRISYNKNSTSHHQHFNHRRRPFGEIHLKVSTIRESKSDDKRFSLFTGTKRLHLRAETREDRVAWVEALQAVKDMFPRMSNSELMAPLDNVTISIEQLRQRLLEEDVSEAAIQDSQQIMRNEFSALQTQLVLLKQKQWILTDTLRQLEDSGHAYYSLFISKMVEKVDLENTVVDESQRQYNDQEESSRVRQEKFCEGSASESEDDNDRNDAAEEETDDDDHAFFDTRDFLSSSSFKSNGSDLRVSSFSSGDDGLYIVESEDELDPLVRSVAPNYPYVKRRKKLPEPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPISSVQKCFEEMEYSYLLDCAYEWGRRGNSLLRILYVAAFAVSGYASTEGRICKPFNPLLGETYEADFPDKGLRFFSEKVSHHPMIVACHCEGKGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFKWSKVTTSIYNLILGKLYCDHYGTMRIQGNQEYSCKLKFKEQSIIDRNPHQVQGIVQDRKGKTVATLFGKWDESMYYVNGDCVGKGKGYDSSSEAHLLWKRSKPSKFLTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEFEMANSEKLRLEQRQRQARKMQERGWKPRWFAMDKASGTYRYLGGYWEARERGSWDSCPDIFGQIPSDHLSD 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0316 776 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 50 754 IPR000648 GO:0008289
Lele28g0316 776 Pfam Pleckstrin homology domain 56 176 - -
Lele28g0316 776 MobiDBLite consensus disorder prediction 8 27 - -
Lele28g0316 776 CDD PH_ORP_plant 51 187 - -
Lele28g0316 776 MobiDBLite consensus disorder prediction 1 27 - -
Lele28g0316 776 Pfam Oxysterol-binding protein 400 755 IPR000648 GO:0008289
Lele28g0316 776 FunFam oxysterol-binding protein-related protein 1D isoform X1 486 658 - -
Lele28g0316 776 SMART PH_update 49 182 IPR001849 -
Lele28g0316 776 FunFam Oxysterol-binding protein-related protein 2A 697 768 - -
Lele28g0316 776 Coils Coil 708 728 - -
Lele28g0316 776 Gene3D - 697 756 - -
Lele28g0316 776 ProSiteProfiles PH domain profile. 48 180 IPR001849 -
Lele28g0316 776 Gene3D - 49 182 IPR011993 -
Lele28g0316 776 MobiDBLite consensus disorder prediction 282 324 - -
Lele28g0316 776 SUPERFAMILY Oxysterol-binding protein-like 395 772 IPR037239 -
Lele28g0316 776 SUPERFAMILY PH domain-like 51 180 - -
Lele28g0316 776 Gene3D - 486 659 - -
Lele28g0316 776 MobiDBLite consensus disorder prediction 282 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0316 Lele-ChrLele28 1881245 1886486 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0302 25 1807647 1812918 Lele28g0316 28 1881245 1886486 hybridization
Lele26g0313 26 1849041 1854339 Lele28g0316 28 1881245 1886486 hybridization