Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0221 ATGGCGCTCACGAAATTATTTCTCAAACGAAGGCCCACTCGATTTCCACCTCATATAAAATCACTCCTCAACTCAGTGACATTCCACGAGAAGCAAGCACAACGAGCCAGACGCGCGAATCAGGTATTAACCATGCAGAGTTGCCCCTACCTCACCACCCAAGCATGGGCCCCGACTAGCCTACGTCGGACAAGGCGCCACCCCCTATTACCGACTCACACCGTCAGGCTCCGATCACCATTGCCGATCTCCGCCGTGTCCGCTCCAGTCAAAAATCGAAAGGCTCACTCAATGCCTCCGGAGAAGGCCGAGGTTTTCAAGTCACTGGAACGCTGGGCTTCGGAGGGGCTGCTGCCGCTGCTGAAGCCGGTGGAGCAGAGCTGGCAGCCACAGAACTTCTTGCCCGACTCATCGTTGCCGTTCGATGAATTCATGGATCAAGTGAAGGCACTGCGCGATCGGACGGCCGAGCTCCCGGATGAGTACTTCGTGGTACTAGTGGGTGATATGATCACGGAGGATGCATTGCCTACATACCAGAGCATGATCAACAACCTGGATGCGGTCGGGGACGAGTCCGGAGCAAGCCCGGATCCATGGGCCGTTTGGACCCGTTCTTGGACTGCGGAGGAGAATAGGCATGGGGATTTGCTAAGGACCTATCTCTATCTATCCGGTCGGGTTGATATGCTCATGGTAGAAAAAACCGTACAGTATTTGATTGGAGCCGGAATGGATCCGGGGACAGAAAACAACCCATATTTGGGATTTGTTTACACGTCGTTTCAAGAACGAGCCACATTTGTATCGCACGGCAACACGGCTCGCTTAGCGAAGGAGGGGGGAGACCCGGTGCTGGCGCGCATATGTGGCACCATCGCAGCAGACGAGAAACGCCACGAGAATGCGTATGCGACAATCGTCGAGAAGCTGCTGGAAGTGGACCCCACGGGAGCCATGCAGGCAATCTCGGACATGATGCACAAGAAGATCACCATGCCGGCCCATTTGATGTACGACGGGGAGGACCCACGCCTGTTCGAGCATTTCTCTGCGGTGGCGCAGCGGATGGGGGTGTACACGGCGAACGATTACGCGGACATACTGGAGTTTTTGATCGGACGATGGGGGTTGGAGAAGCTGGAAGGGCTGACGGGCGAAGGGAGGCGTGCACGGGATTTCGTGTGTGGACTAGCACCGAGGATTAGGAAGTTGCAAGAGAGAGCCGATGAGCGAGCGCGCAAGATGGGGGCTCATGGCGTCAAATTCAGCTGGATCTTCAACAAAGAGGTGGCCTTGACCATGTGA 1308 0.5581 MALTKLFLKRRPTRFPPHIKSLLNSVTFHEKQAQRARRANQVLTMQSCPYLTTQAWAPTSLRRTRRHPLLPTHTVRLRSPLPISAVSAPVKNRKAHSMPPEKAEVFKSLERWASEGLLPLLKPVEQSWQPQNFLPDSSLPFDEFMDQVKALRDRTAELPDEYFVVLVGDMITEDALPTYQSMINNLDAVGDESGASPDPWAVWTRSWTAEENRHGDLLRTYLYLSGRVDMLMVEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYATIVEKLLEVDPTGAMQAISDMMHKKITMPAHLMYDGEDPRLFEHFSAVAQRMGVYTANDYADILEFLIGRWGLEKLEGLTGEGRRARDFVCGLAPRIRKLQERADERARKMGAHGVKFSWIFNKEVALTM 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0221 435 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 87 431 IPR005067 GO:0006631|GO:0045300
Lele26g0221 435 PIRSF Dlt9_acylACP_des 58 433 IPR005067 GO:0006631|GO:0045300
Lele26g0221 435 Gene3D Ribonucleotide Reductase, subunit A 86 433 IPR012348 GO:0016491
Lele26g0221 435 SUPERFAMILY Ferritin-like 90 431 IPR009078 -
Lele26g0221 435 Pfam Fatty acid desaturase 101 427 IPR005067 GO:0006631|GO:0045300
Lele26g0221 435 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 85 433 - -
Lele26g0221 435 CDD Acyl_ACP_Desat 101 409 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0221 Lele-ChrLele26 1281231 1282835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0221 76 433 Acyl Lipid Metabolism Gene Families AT1G43800 76.923 0.0 590
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0221 26 1281231 1282835 Lele27g1875 27 23481327 23482848 hybridization
Lele26g0221 26 1281231 1282835 Lele28g0230 28 1337930 1339408 hybridization