Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0230 ATGCAGAGTTACCCCTACCTCACCACCCAAGCATGGCCCCCGACTAGCCTACATCAGACAAGGCGCCACCCCCGATTACCGACTCACACCGTCGGGCTCCGATCACCACTGCCGATCTCCACCGTCTCCGCTCCAGTCAAAAATCGAAAGGCTCACTCAATGCCGCCGGAGAGGGCCGATGTTTTCATGTCACTGGAACGTTGGGCTTCGGAGGGGCTGCTGCCGCTGCTGAAGCCGGTGGAGCAGAGCTGGCAGCCACGGAACTTCTTGCCCGACTCATCGTTGCCGTTCGATGAATTCATGGATCAAGTGAAGGCACTGCGCGATCGGACGGCCGAGCTCCCGGATGAGTACGTCGTGGTACTGGTGGGTGATATGATCACGGAGGATGCATTGCCTACATATCAAAGCTCGATCAACAACCTGGATGCGGTCGGGGACGAGTCCGGAGCAAGCCCGGATCCGTGGGCCGATCCGGGGACGGAAAACAACCCATATTTGGGATTCGTTTACACGTCGTTTCAAGAGCGAGCCACGTTTGTATCGCACGGCAACACGGCTCGCTTAGCGAAGGAGGGGGGAGACCCGGTGCTGGCTCGGATATGTGGCACCATCGCAGCAGACGAGAAACGCCACGAGAATGCGTACGCGACAATCGTCGAGAAGCTGCTGGAAGTAGACCCCACGGTAGCCATGCTGGCCATCGCGGACATGATGCACAAGAAGATCACCATGCCGGCCCATTTGATGTACGACGGGGAGGACCCACGCCTGTTCGAGCATTTCTCTGCGGTGGCGCAGCGGATGGGGGTGTACACGGCGAACGATTACGCGGACATACTGGAGTTTTTGATCGGACGATGGAGGTTGGAGAAGCTGGAAGGGCTGACGGGCGAAGGCGGCCGTGCACGGGATTTCGTGTGTGGACTAGCACCGAGGATTAGGAAGTTGCAAGAGAGAGCCGATGAGCGAGCGCGCAAGATGGGGGCTCATGGCGTCAAATTCAGCTGGATCTTCAACAAAGAGGTGGCCTTGACCATGTGA 1044 0.5852 MQSYPYLTTQAWPPTSLHQTRRHPRLPTHTVGLRSPLPISTVSAPVKNRKAHSMPPERADVFMSLERWASEGLLPLLKPVEQSWQPRNFLPDSSLPFDEFMDQVKALRDRTAELPDEYVVVLVGDMITEDALPTYQSSINNLDAVGDESGASPDPWADPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYATIVEKLLEVDPTVAMLAIADMMHKKITMPAHLMYDGEDPRLFEHFSAVAQRMGVYTANDYADILEFLIGRWRLEKLEGLTGEGGRARDFVCGLAPRIRKLQERADERARKMGAHGVKFSWIFNKEVALTM 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0230 347 Gene3D Ribonucleotide Reductase, subunit A 42 157 IPR012348 GO:0016491
Lele28g0230 347 Gene3D Ribonucleotide Reductase, subunit A 158 345 IPR012348 GO:0016491
Lele28g0230 347 MobiDBLite consensus disorder prediction 15 38 - -
Lele28g0230 347 PIRSF Dlt9_acylACP_des 13 158 IPR005067 GO:0006631|GO:0045300
Lele28g0230 347 PIRSF Dlt9_acylACP_des 157 345 IPR005067 GO:0006631|GO:0045300
Lele28g0230 347 SUPERFAMILY Ferritin-like 46 343 IPR009078 -
Lele28g0230 347 CDD Acyl_ACP_Desat 57 321 IPR005067 GO:0006631|GO:0045300
Lele28g0230 347 Pfam Fatty acid desaturase 58 157 IPR005067 GO:0006631|GO:0045300
Lele28g0230 347 Pfam Fatty acid desaturase 158 339 IPR005067 GO:0006631|GO:0045300
Lele28g0230 347 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 158 343 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0230 Lele-ChrLele28 1337930 1339408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0230 34 345 Acyl Lipid Metabolism Gene Families AT1G43800 64.917 5.06e-167 469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0221 26 1281231 1282835 Lele28g0230 28 1337930 1339408 hybridization