Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0213 ATGGAGAGGCTTCAAAGGATGTTCGCAGGAAGGTCTGGTGTTCCCATGGAAGTTATGGGCTTGATGTTGGGAGAGTTTGTGGATGAGTACACTGTCCGCGTTGTAGATGTTTTTGCGATGCCACAGAGCGGTACCGGTGTTAGTGTTGAAGCCGTGGATCACGTTTTTCAGACTAACATGCTCGATATGCTGAAACAGACTGGAAGGCCAGAGATGGTTGTGGGGTGGTATTATTCCCATCCTGGATTTGGCTGTTGGCTTTCAGGAGTGGACATAAATACACAACAGGCTTTAAATCCACGTGCTGTGGCTGTGGTGGTCGATCCTATTCAGAGTGTTAAAGGCAAGGTGGAGATTGATGCCTTTAGGCTTATCAATCCACAAACTATGATGCTGGGCTTTGATCCATGGATTGAATCGACATTATTATTCATAGCAATCAATTACAGGAAAAATGAGCTTGAAGAGAAGATGTTACTTAAGCTTCACAAGAAAAAATGGACTGATGGTTTGACACTAAGGCGTTTTGATTCACATTCCAAAACTAATGAACAGACTGTCCAAGAGATGCTGAATTTAGCCGTCAAGTACAACAAGGCAGTGCAAGAGGAGGATGAGCTTCCGCCAGAAAAGCTAGCAATTTCTAACGTGGGAAAGCAAGATGCTAAGAAGCACCTTGAAGAGCACGTTTCCAATTTGATGTCTTCTAACATTGTTCAGGCTTTGGGAATGATGCTAGATACCGTTGTATTTTAG 756 0.4365 MERLQRMFAGRSGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYYSHPGFGCWLSGVDINTQQALNPRAVAVVVDPIQSVKGKVEIDAFRLINPQTMMLGFDPWIESTLLFIAINYRKNELEEKMLLKLHKKKWTDGLTLRRFDSHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAISNVGKQDAKKHLEEHVSNLMSSNIVQALGMMLDTVVF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0213 251 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 7 248 - -
Lele26g0213 251 SMART pad1_6 1 127 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lele26g0213 251 ProSiteProfiles MPN domain profile. 1 128 IPR037518 -
Lele26g0213 251 Gene3D Cytidine Deaminase, domain 2 4 176 - -
Lele26g0213 251 SUPERFAMILY JAB1/MPN domain 9 130 - -
Lele26g0213 251 CDD MPN_RPN11_CSN5 10 228 - -
Lele26g0213 251 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 16 98 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0213 Lele-ChrLele26 1252689 1255250 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0213 26 1252689 1255250 Lele27g1883 27 23515879 23518438 hybridization
Lele26g0213 26 1252689 1255250 Lele28g0223 28 1302150 1308520 hybridization