Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1524 ATGTGGAGCTCAAGCTCTATCTCTCCTCTGCTCACTCTGTTTCTTCTTCACTCGGTGGTAGCTCTTGTCTCTGCCCAGGGATCTACCAGAACCACTTGGAAGACACTAAACGGAGCTGCACCATTAGTCATAGCACGTGGGGGATTTTCGGGGATATTTCCTGATTCCAGCCTAGCTGCTTACAATTTGGCGCTAATAACCAGCGTACCAAATGTCATTTCATGGTGTGACGTGCAATTAACAAAAGATGGAGCTGGGATTTGTCTTCCAGATGTCAAACTTGACAATGCTACTGACATTTCTTCAATTTTTCAAAATAAATCCACCACTTACTTAGTTAATGGCGTACAAACCCATGGATATTTTTCAGTGGATTACATGACAAAGGATCTATCTCAAGTTTTTTTGGCTCAGGGAGTCTTTTCTCGAACTAACAAGTTTGACGGTAATGCATTTCCAATTTTTACTGTTGAGGAACTTGTTAAACAAGTTGCCCCGTCAATCTTGTGGTTGAACATTCAGCATGACATTTTCTACTCGGAACACAATCTGAGTATGAGAAACTTTGTACTTTCTGTTTCAAGAAAAGTAATCGTCAAATATATCTCATCACCTGAGGTGAATTTCCTGAGAGGTATAGTGGCACGCTTTAACCCAAATATAACTAAACTGGTCTTCAGATTTATGGGACAGGATGACACAGAACCATCAACCAATCAGACTTATGGCTCACTTCAAAAAAATCTTACATTTATCAAGACATTTGCTTCTGGAATTATGGTTCCCAAGAGTTACATATGGCCTGTAGATGATGGATATCTACAGGCACCTACAACTTTGGTCTCAGATGCTCACAAAGCAGGACTGGAAGTTTTTGCATCAGATTTTACTAATGACATTCCAGTTAGCTATAATTACAGTTATGATCCTCTTGCTGAGTACCTCCAGTTCATTGATAATGGTGACTTCTCTGTTGATGGTGTGCTGTCTGACTTTCCTATAACTCCATCTCAAGCTGTGGGTTGCTTTGCTCACCTACGTCCAAATGCTGCAAAAACAGTTAACATTTCTGTTATCTCAAAATTTGGGGCTAGTGGAGACTATCCTCCGTGTACTGACTTGGCATACAAGAAGGCCATATCAGATGGTGTGGATGTTCTTGATTGTCCTGTTCAACTTTCAAAAGATGGAATACCATTTTGCCTAAGCTCCATAGATCTCATAGAGAGCTCAACAGTTGCTCAATCAAGTTTCAGCAGACTAGCCACATCTATTACTAAGATCAAGTCTGGCAGTGGCATATTTTCATTCAGTTTGACATCGGATAACATTAATACCTTGACCCCCTCAATTTTGAACCCATATGCAAAATACACACTGTTCAGGAATCCAAAAAATAAGAACGCCGGGAACTTTTTGACATTAGAAGATTTCTTGTCCTTGGCAAAAAACCAGACTTCTCTGTCTGGTGTCTTGATCACTGTTGAGCATGCAGCCTATCTTGCAGGAAAGGTAGGACTAAATGCGATTGATGCAGTCCTTACTGCTTTGAGCAAAGCTGGCTATGATAAGCAAGTGGCACAAAAAGTTCTGATTCAGTCCTCTGATAGCTCTGTACTAAAAGAATTCAAGGATAAATCTAAATACGAGCTTGTCTATTACATTGATAAGGATGTCAGTGATGCTGACAATGCAGTTGTTGAAGAGATCAAAGGCTTTGCGAATTCTGTGGTTGTTGCAAAGTCATCCGTGTTTCCTGAGAACTCTGCCTTCCTGACTGGCTCTACCAAAATTGTGCCAAAGCTAAAATCTTATAACCTCTCTGTCTATGTAGAAACATTTGACAATGAGTTTGTATCACAGGCTTGGGATTTCTTCTCTGATGGAACTGTGGAGATCAACTCATTCGTTCAGGGAGCTGGTATTGATGGCGTCGTCACAAGCTTCCCAAAGACCGCTAATAGATACAGCAGGAATCCTTGTTTGTCAGCTACACCTACACCTCCTTATATGCAAGCCGCTAAAGCTGGCGATCTTTTACAACTTGTTACCAGAGAATACCTGCCACCGGCCGAGGCTCCTCTCTCTTCTCTGACAGAATCTGAAGTGTCGGAGTCACCTCTACCTCCCGTTACAAATACAATGGCCAAAGCTCCAGCCCCTGCCTCCGGAACGGGGACTCCGCCTGGCAACACACAGGCAAAGGTTAACATCTGCCACTTTTTGTCCACTCTAGCTGTGCTTGTGTCTTTCCTTTTGCTCCATTAA 2268 0.4202 MWSSSSISPLLTLFLLHSVVALVSAQGSTRTTWKTLNGAAPLVIARGGFSGIFPDSSLAAYNLALITSVPNVISWCDVQLTKDGAGICLPDVKLDNATDISSIFQNKSTTYLVNGVQTHGYFSVDYMTKDLSQVFLAQGVFSRTNKFDGNAFPIFTVEELVKQVAPSILWLNIQHDIFYSEHNLSMRNFVLSVSRKVIVKYISSPEVNFLRGIVARFNPNITKLVFRFMGQDDTEPSTNQTYGSLQKNLTFIKTFASGIMVPKSYIWPVDDGYLQAPTTLVSDAHKAGLEVFASDFTNDIPVSYNYSYDPLAEYLQFIDNGDFSVDGVLSDFPITPSQAVGCFAHLRPNAAKTVNISVISKFGASGDYPPCTDLAYKKAISDGVDVLDCPVQLSKDGIPFCLSSIDLIESSTVAQSSFSRLATSITKIKSGSGIFSFSLTSDNINTLTPSILNPYAKYTLFRNPKNKNAGNFLTLEDFLSLAKNQTSLSGVLITVEHAAYLAGKVGLNAIDAVLTALSKAGYDKQVAQKVLIQSSDSSVLKEFKDKSKYELVYYIDKDVSDADNAVVEEIKGFANSVVVAKSSVFPENSAFLTGSTKIVPKLKSYNLSVYVETFDNEFVSQAWDFFSDGTVEINSFVQGAGIDGVVTSFPKTANRYSRNPCLSATPTPPYMQAAKAGDLLQLVTREYLPPAEAPLSSLTESEVSESPLPPVTNTMAKAPAPASGTGTPPGNTQAKVNICHFLSTLAVLVSFLLLH 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1524 755 Coils Coil 753 755 - -
Lele25g1524 755 MobiDBLite consensus disorder prediction 694 729 - -
Lele25g1524 755 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 354 657 - -
Lele25g1524 755 ProSiteProfiles GP-PDE domain profile. 356 657 IPR030395 GO:0006629|GO:0008081
Lele25g1524 755 MobiDBLite consensus disorder prediction 697 711 - -
Lele25g1524 755 Gene3D Phosphatidylinositol (PI) phosphodiesterase 357 656 IPR017946 GO:0006629|GO:0008081
Lele25g1524 755 Gene3D Phosphatidylinositol (PI) phosphodiesterase 39 339 IPR017946 GO:0006629|GO:0008081
Lele25g1524 755 Pfam Glycerophosphoryl diester phosphodiesterase family 48 333 IPR030395 GO:0006629|GO:0008081
Lele25g1524 755 Pfam Glycerophosphoryl diester phosphodiesterase family 363 651 IPR030395 GO:0006629|GO:0008081
Lele25g1524 755 SUPERFAMILY PLC-like phosphodiesterases 358 656 IPR017946 GO:0006629|GO:0008081
Lele25g1524 755 ProSiteProfiles GP-PDE domain profile. 41 340 IPR030395 GO:0006629|GO:0008081
Lele25g1524 755 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 12 743 - -
Lele25g1524 755 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 39 339 - -
Lele25g1524 755 SUPERFAMILY PLC-like phosphodiesterases 41 339 IPR017946 GO:0006629|GO:0008081
Lele25g1524 755 CDD GDPD_SHV3_repeat_2 358 656 - -
Lele25g1524 755 CDD GDPD_SHV3_repeat_1 41 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1524 Lele-ChrLele25 11924502 11931463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1524 10 754 Receptor kinase-like Gene Family AT4G26690 54.521 0.0 830
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1524 25 11924502 11931463 Lele27g0558 27 13219718 13226789 hybridization
Lele25g1524 25 11924502 11931463 Lele28g1539 28 12440140 12447329 hybridization