Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1457 ATGGCCGGAGTCACCGTGAATGGCACCGATCAACCAAAGTCAGACAAACCATCTAAAATTGTCATCCTAGATGATGGTATCAGCGGCGGCAAAGAAGAAGAAGAGATAAATGACAATCCGATCGAACAAGTGAGGCTGACTGTACCAATCACCGATGACCCAGACCAACCAGCGTTGACGTTTCGAACATGGGTACTAGGTTTAGTGTCGTGTATAATTCTTGCGTTCGTGAACCAGTTCTTCAGTTACAGGACGAACCAGCTTTCGATTTCGTCTGTGTCGGCCCAGATTGTGAGCTTACCTCTGGGGAAGCTCATGGCGGCGACATTGCCCAGAAAACAGATGAGGGTCCCACTCACGAGGTGGTCGTTTTCTCTGAATCCAGGACCTTTTACTCTGAAAGAGCACGTGCTTATCACCATCTTTGCCAGCTCTGGTTCAAGTGGGGTTTACGCCATTAATATTATTACCATTGTTAAAGCTTTTTATCATCGCAGTATTCATCCCTTGGCTGCTTATTTGCTTGCGATAACTACACAGATGATTGGATATGGATGGGCTGGAGTATTTAGGAAGTTCCTTGTTGACTCTCCTTATATGTGGTGGCCAGCAAATCTTGTTCAGGTCTCTCTATTCAGGGCATTCCATGAGAAAGAAAGGAGGCCAAAGGGAGGAACCACAAGACTTCAATTCTTCTTCCTGGTCTTTGCAACAAGCTTTGCGTATTACATTATCCCTGGCTACTTCTTCCAATCAATCTCAGCCATTTCATTCGTTTGTTTGATCTGGAAGAAGTCTGTGACCGCCCAGCAGATCGGCTCTGGCATGTCCGGCCTCGGCATAGGCTCCTTCGGCCTCGACTGGAACACAGTGGCAGGTTTCTTGGGCAGCCCCTTGGCCAACCCAGGCTTTGTCATTATCAACGTCCTTGTTGGCTTCTGCTTGTTCCTCTACGTTGTCATCCCCATTGCTTATTGGTCCAATGCTTTCGAAGCCAAGAAGTTCCCACTCTTTAGCTCTCACACCTTTGACTCCACTGGTGCAAAGTACAATGTCACTAGGGTTTTGAATCAAGCAAACTTCGACATTGATATGGATCAATATAACAGTTACAGCAAGCTCTATTTGAGTGTCTTGTTTGCCTTCAACTATGGCCTCAGCTTCGCAACTCTCACTGCTACTATCTCACATGTTTGCCTCTTTCATGGAAAAACTATATATGAGATGTGGAAGAAGACGACAGATCAGCTAAAAGGTGAATTCGCAGATGTGCACACAAGGATTATGAAGAAGAACTACGAACAAGTTCCTGATTGGTGGTTTGTTTCTATTTTGGTAACAATGGGCGGTCTTGGTTTATTTGCTTGTCAAGGTTTTGGAGGTCAGCTTCAACTTCCATGGTGGGGAGTTTTATTCTCTTTCGCTATTGCATTTGTGTTCACTTTGCCTATTGGAGTCGTCCAAGCCACAACAAACATGCAAGTAGGGCTTAATGTCATCACAGAGTTAATTATTGGGTTCATTTACCCCGGAAAGCCTCTTGCTAATGTAGCTTTCAAGACCTACGGCTATATCAGCATGGCTCAAGCCCTTAGCTTTGTTTCTGATTTCAAATTAGGGCACTACATGAAAATTCCTCCTAAATCTATGTTCATTGTCCAGTTGGCTGGAACCGTAGTTGCTTCTTTGGTGTATTTTGGAACAGCATGGTGGCTTCTAACAACAGTAGAAAACATCTGTGACCCAAGTCTATTATCAGAAGGAAGTCCATGGACATGCCCAGGCGACGATGTGTTCTACAACGCATCGATCATTTGGGGAGTGATAGGCCCCAAAAGAATGTTCACAAAAGAAGGAAACTACCCACAAATGAACTGGTTCTTCCTCATCGGTCTCGTCGCTCCGGTCCCGGTTTGGATTCTCTCACACAAGTTCCCAAACCAGAAATGGATACCTCTCATAAACATGCCCATCATTTTAAGTGGAGCTGGAGGATTACTTCCTGCAAAATCTGTGAATTATATAATGTGGGGCATTGTTGGAATTTTCTTCAACTTTTATGTGTATAGAAAGTTTAAGGGTTGGTGGGCGAGACATACGTATATTCTTTCTGCTGCTCTTGATGCTGGGGTTGCTTTTACTGGTGTTCTTCTGTTTTTTACCTTACAAAGTTATGATATTTTGGGTCCTTCTTGGTGGGGTCTTGAAGCTGATGATCATTGTAATTTGGCTAAGTGTCCTACAGCACCAGGTGTTAAGGCTCCAGCAGGATGCCCTACTTTTTAA 2286 0.4444 MAGVTVNGTDQPKSDKPSKIVILDDGISGGKEEEEINDNPIEQVRLTVPITDDPDQPALTFRTWVLGLVSCIILAFVNQFFSYRTNQLSISSVSAQIVSLPLGKLMAATLPRKQMRVPLTRWSFSLNPGPFTLKEHVLITIFASSGSSGVYAINIITIVKAFYHRSIHPLAAYLLAITTQMIGYGWAGVFRKFLVDSPYMWWPANLVQVSLFRAFHEKERRPKGGTTRLQFFFLVFATSFAYYIIPGYFFQSISAISFVCLIWKKSVTAQQIGSGMSGLGIGSFGLDWNTVAGFLGSPLANPGFVIINVLVGFCLFLYVVIPIAYWSNAFEAKKFPLFSSHTFDSTGAKYNVTRVLNQANFDIDMDQYNSYSKLYLSVLFAFNYGLSFATLTATISHVCLFHGKTIYEMWKKTTDQLKGEFADVHTRIMKKNYEQVPDWWFVSILVTMGGLGLFACQGFGGQLQLPWWGVLFSFAIAFVFTLPIGVVQATTNMQVGLNVITELIIGFIYPGKPLANVAFKTYGYISMAQALSFVSDFKLGHYMKIPPKSMFIVQLAGTVVASLVYFGTAWWLLTTVENICDPSLLSEGSPWTCPGDDVFYNASIIWGVIGPKRMFTKEGNYPQMNWFFLIGLVAPVPVWILSHKFPNQKWIPLINMPIILSGAGGLLPAKSVNYIMWGIVGIFFNFYVYRKFKGWWARHTYILSAALDAGVAFTGVLLFFTLQSYDILGPSWWGLEADDHCNLAKCPTAPGVKAPAGCPTF 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1457 761 Pfam OPT oligopeptide transporter protein 59 721 IPR004813 GO:0035673
Lele25g1457 761 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 38 724 IPR004648 GO:0055085
Lele25g1457 761 PANTHER ISP4 LIKE PROTEIN 32 759 IPR004648 GO:0055085
Lele25g1457 761 MobiDBLite consensus disorder prediction 1 20 - -
Lele25g1457 761 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 43 723 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1457 Lele-ChrLele25 10855572 10861376 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1457 9 761 Organic Solute Cotransporters AT4G26590 66.799 0.0 1044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1457 25 10855572 10861376 Lele27g0623 27 14188172 14194959 hybridization
Lele25g1457 25 10855572 10861376 Lele28g1484 28 11166420 11179749 hybridization