Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0623 ATGGCCGGAGTCGCCGTGAACGGCACCGATCAGCCAAACTCAGACAAACCATCCAAGATTTTCATCCTAGATGATAATGGTATCGGCGGCGGCAAAGAAGAAGAAGAAGAGATAAACGACAATCCGATCGAACAAGTGAGGCTGACGGTACCGATCACCGACGACCCAGACCAACCGGCTTTGACGTTTCGAACATGGGTACTAGGTCTAGTGTCGTGTATAATCCTGGCATTCGTGAACCAGTTCTTCAGTTACAGGACGAACCAGCTCTCGATTTCGTCCGTGTCCGCTCAGATTGTGAGCTTACCACTTGGGAAGCTCATGGCGGCGACATTGCCCAGAAAACAGATAAGGGTCCCGCTCACGAGATGGTCGTTTTCTCTGAATCCTGGACCTTTTACTCTGAAAGAACACGTGCTTATCACCATGTTTGCCAGCTCTGGTTCAAGTGGGGTTTACGCCATTTACATTATTACCATTGTTAAGGCTTTCTACCATCGGAGTATTCATCCCTTGGCTGCTTATTTGCTTGCACTAACTACTCAGATGATTGGATATGGATGGGCTGGAGTATTTAGGAAGTTCCTCGTTGACTCTCCTTATATGTGGTGGCCAGCAAATCTTGTTCAGGTCTCTTTATTCAGGGCATTCCACGAGAATGAAAGGAGGCCAAAGGGAGGAACCACAAGACTTCAATTCTTCTTCCTGGTCTTTGCAACAAGCTTTGCATATTACATAATACCTGCCTATTTCTTCCCATCAATCTCAGCCATATCCTTCGTTTGTTTCATCTGGAAGAACTCCGTCACTGCCCAGCAGATCGGCTCCGGCATGTCCGGCCTTGGCATCGGCTCCTTTGGCCTCGACTGGAACACAGTGGCCGGTTTCTTGGGCAGCCCCTTGGCCAACCCAGACTTCGTCATCGTCAATGTCCTCGTCGGCTTCTGCTTGTTCCTCTACGTCGTCGTCCCCATTGCTTATTGGTCCAATTCTTTCGAAGCCAAGAAGTTTCCTCTGTTTAGCTCTCACACATTTGACCCCACTGGTGAAAAGTACAATGTCACTAGGATTTTGAATCAAGCAACCTTCGACATTAATATGGACCAATATAACAGTTACAGCAAGCTCTATTTGAGTGTTTTGTTTGCTTTTAACTATGGCCTCAGCTTCGCAACTCTCACTGCTACTATCTCACATGTTTGCCTCTTTCATGGAAAAACTATATATGAGATGTGGAAGAAGACGACAGATCAGCTAAAAGGTGAATTCGCAGATGCGCACACAAGGATTATGAAGAAGAACTACGAACAAGTTCCTGATTGGTGGTTTGTTTCTATTTTGGTAACAATGGGCGGTCTTGCTTTATTTGCTTGTCAAGGTTTTGGAGGTCAGCTTCAACTTCCATGGTGGGGAGTTTTATTCTCTTTCGCTATTGCCTTTGTGTTCACTTTGCCTATTGGAGTCGTCCAAGCCACAACAAACATGCAAGTAGGGCTTAACGTCATCACAGAGTTAATTATTGGGTTCATTTACCCCGGAAAGCCTCTTGCTAATGTAGCTTTCAAGACCTACGGCTATATCAGCATGGATCAAGCCCTTAGATTTGTTTCTGATTTCAAATTAGGGCACTACATGAAAATTCCTCCTAAATATATGTTCATTGTCCAGTTGGCTGGAACCATAGTTGCTTCTATGGTGTACTTTGGAACAGCATGGTGGCTTCTAACAACTGTAGAAAACATCTGTGACCCAAGTCTATTATCAGAAGGAAGTCCATGGACATGCCCAGGAGGCGATGTGTTCTACAACGCATCAATAATTTGGGGAGTGATAGGCCCCAAAAGAATGTTCACAAAAGAAGGAAACTACCCACAAATGAACTGGTTCTTCCTCATCGGTCTCGTCGCTCCGGTCCCGGTTTGGATTCTCTCACACAAGTTCCCGAACCAGAAATGGATTCCTCTCATAAATATGCCTATCATTTTGAGTGGAGCTGGAGGATTACTTCCTGCAAAAGCTGTGAATTACATTATGTGGGGAATTGTTGGAATTTTCTTCAACTTTTATGTGTATAGAAAGTTCAAGGCTTGGTGGGCGAGGCATACTTATATTCTTTCTGCTGCTCTTGATGCTGGGGTTGCTTTTACTGGTGTTCTTCTGTTTTTTACCCTACAAAGTTTTGATATTTTGGGCCCTAGTTGGTGGGGTCTTGAAGCTGATGATCATTGTAATTTGGCTAAGTGCCCTACAGCACCAGGTGTTAAGGCTCCTGGATGCCCTACTTTTTAA 2289 0.4504 MAGVAVNGTDQPNSDKPSKIFILDDNGIGGGKEEEEEINDNPIEQVRLTVPITDDPDQPALTFRTWVLGLVSCIILAFVNQFFSYRTNQLSISSVSAQIVSLPLGKLMAATLPRKQIRVPLTRWSFSLNPGPFTLKEHVLITMFASSGSSGVYAIYIITIVKAFYHRSIHPLAAYLLALTTQMIGYGWAGVFRKFLVDSPYMWWPANLVQVSLFRAFHENERRPKGGTTRLQFFFLVFATSFAYYIIPAYFFPSISAISFVCFIWKNSVTAQQIGSGMSGLGIGSFGLDWNTVAGFLGSPLANPDFVIVNVLVGFCLFLYVVVPIAYWSNSFEAKKFPLFSSHTFDPTGEKYNVTRILNQATFDINMDQYNSYSKLYLSVLFAFNYGLSFATLTATISHVCLFHGKTIYEMWKKTTDQLKGEFADAHTRIMKKNYEQVPDWWFVSILVTMGGLALFACQGFGGQLQLPWWGVLFSFAIAFVFTLPIGVVQATTNMQVGLNVITELIIGFIYPGKPLANVAFKTYGYISMDQALRFVSDFKLGHYMKIPPKYMFIVQLAGTIVASMVYFGTAWWLLTTVENICDPSLLSEGSPWTCPGGDVFYNASIIWGVIGPKRMFTKEGNYPQMNWFFLIGLVAPVPVWILSHKFPNQKWIPLINMPIILSGAGGLLPAKAVNYIMWGIVGIFFNFYVYRKFKAWWARHTYILSAALDAGVAFTGVLLFFTLQSFDILGPSWWGLEADDHCNLAKCPTAPGVKAPGCPTF 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0623 762 MobiDBLite consensus disorder prediction 1 40 - -
Lele27g0623 762 PANTHER ISP4 LIKE PROTEIN 33 760 IPR004648 GO:0055085
Lele27g0623 762 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 40 726 IPR004648 GO:0055085
Lele27g0623 762 Pfam OPT oligopeptide transporter protein 61 723 IPR004813 GO:0035673
Lele27g0623 762 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 45 725 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0623 Lele-ChrLele27 14188172 14194959 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0623 13 762 Organic Solute Cotransporters AT5G55930 67.600 0.0 1038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1457 25 10855572 10861376 Lele27g0623 27 14188172 14194959 hybridization
Lele26g1489 26 10759529 10762404 Lele27g0623 27 14188172 14194959 hybridization