Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1423 ATGGCTCATTTTGTCATGACTGTTGAGAAACACTTGCAAACATTCTCTCCCCGGGAGAGGAAGAAGATGCCAGACATCTTGAACTGGCCAGGTGGTAGGGTCAAACTCGCAATAAAATATCACCAGGCTTTAGAGGCGTCAATCGCAAGGAACTTCCTTGATAATGGCATTATTTGTGGCATGAGTCACAATACCGATGGATTGTATTGTGACAAGCCCGGACAGATATGGAACCTGAATGATTTCTCCGGAGTCGTCGGGGTGTTCAATTGTGAAGGAGCGGGATGGTGCAAACTTAGAAAGCAAAACCTTATCCATGATGAGAATCCAGGAACAATCACCGGCGTCATTAGGGCTAAGGATATTGATTATCTATCTAAGGTTGCTGATGAGAAATGGAATGGAGACGCCATTATGTTTTCCCATGTTGGTGGTACAGAGGTTACATACCTTCCAAAAGATGCATTCATTCCTATTACATTGAAATCCAAAGAATTTGAATTCTTCACAGTAGTTCCTGTTAATGAAGTTAATGGTGGTGCCAAATGTGCTCCTAGTGGTTTGATAAAGATGTTCAACTCTGGAGGAGCCATCAAGGAGTTAAATTGTGTTGTATCTAATGATGGAACTACTACAAGTGTTGTCATGAAAGCACGAGGAGGCTGTGGTTTTTTTGGAGCTTATTCGTCCGCTCGACCTAAGACAGTGACAGTGGATTCAGAGGAGCTGGGGTTCAGATATGAGGAAGGATCTGGGCTGGTAACTATTGACTTGAGAATACCTGAGGAAGAGTTGAACCAGTGGAACATATCTATCAACTACTGA 825 0.4303 MAHFVMTVEKHLQTFSPRERKKMPDILNWPGGRVKLAIKYHQALEASIARNFLDNGIICGMSHNTDGLYCDKPGQIWNLNDFSGVVGVFNCEGAGWCKLRKQNLIHDENPGTITGVIRAKDIDYLSKVADEKWNGDAIMFSHVGGTEVTYLPKDAFIPITLKSKEFEFFTVVPVNEVNGGAKCAPSGLIKMFNSGGAIKELNCVVSNDGTTTSVVMKARGGCGFFGAYSSARPKTVTVDSEELGFRYEEGSGLVTIDLRIPEEELNQWNISINY 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1423 274 PANTHER - 31 73 IPR008811 -
Lele25g1423 274 Pfam Raffinose synthase or seed imbibition protein Sip1 31 70 IPR008811 -
Lele25g1423 274 Pfam Raffinose synthase or seed imbibition protein Sip1 75 257 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1423 Lele-ChrLele25 10361708 10364950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g1423 31 81 Glycoside Hydrolase AT1G55740 70.588 5.54e-15 72.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1423 25 10361708 10364950 Lele27g0665 27 14600072 14600847 hybridization
Lele25g1423 25 10361708 10364950 Lele28g1434 28 10428777 10439841 hybridization