Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1434 ATGGCAGTCTCGGCAGCAGGGCGGTTGCCTCTGTCAGCGCCGGTCGGCTTACGGGGAAGGAGACGATTGGTTGGAAGGGAGTGGGGGCTTGTGAAACTGAAGCGAAACGAACAAGGAGGCGGTTGCTGCAAATTGAATGGCAGAAAACGAATCATTAGTTTCTCTCAAACGGTGGCTTCTGAGGCTGCCCAATCTCAGATGACAGTGGGAGCTGGGATTTCTGTGGCCGATGCCAGCTTGGTGGTGTTGGGGAAGAAGGTCCTCACTCAGGTTCCCCAAAACGTCGTCGTTACCCCCTCCTCTTCAATCCTCAATGGGGCTTTCATTGGAGTCGATTCTGATCGCAAGGGCAGCCGAAGAGTGTTCCCCATCGGAAAACTACAGGGGTTGCGCTTTATGTGTGTATTTCGCTTCAAAATGTGGTGGATGACGCAGAGAATGGGTACCCATGGGCTAGATATTCCCTTTGAAACACAGTTCTTACTTGTGGAAGCGCACAAGAGTTCTGATATTGATGGGATCAGAAACGGAGAAGAAGACACTTATGCTGTTTTCTTGCCTCTTCTGGAAGGAGATTTCAGAGCTGTTCTTCAAGGAAATGCACAAAACGAGATAGAGATCTGTGTGGAAAGTGGATGTCCTGATGTTGAGGGATTTGATGGGACTCATCTGGTATACGTTGGAGCAGGATCACACCCTTTTGAAGTCATTTCAAATGCGGTCAAGACTGTTGAGAAACACTTGCAAACATTCTCTCACCGTGAGAGGAAGAAGATGCCAGACATCTTGAACTGGTTTGGTTGGTGTACATGGGATGCTTTCTATACCAATGTCGATTCAGAAGGAGTAAAGCAAGGATTGCAAAGCTTAGAGCAAGGTGGGATTCCTGCTAAGTTTGTTATAATTGATGATGGATGGCAATCTGTGGGAATGGACCCTAACGGTATCAAATGGGAATGTGATTTTGCTGCCAATTTTGCAAATCGCCTGACACATATGAAAGAGAATCACAAGTTTCAGAAGGATGGCAAAGAGGGTCATAGAGAAGAGGATCCTGCTCTGGGACTTCGTCATATTACCGAAGACATCAAAGAGCAGCATGATATTAAGCACATTTATGTGTGGCATGCTATAACAGGATACTGGGGTGGCGTTAAACCTGGGGTTACTGGAATGGAGCACTATGAGTCAAAAATGGCCTACCCTGTACAATCTCCTGGGGTTGAATCAAATCAACCAGATGAAGCTCTAACAACCATTTCCAAGAATGGGCTTGGCCTTGTGAATCCTGAGAAAGTTTTTCACTTTTATAATGAACTCCACTCATATCTTGCATCTGCTGGTATTGATGGTGTCAAAGTTGATGTTCAGAATATCCTTGAAACCCTCGGGGCAGGCCATGGTGGTAGGGTCAAACTTGCAAGAAAATATCACCAGGCTTTAGAGGCATCAATCGCAAGGAACTTCCCTGATAATGGCATTATTTGTTGCATGAGTCACAATACTGATGGATTGTACAGTTCAAAGCGATCAGCATTAGTTAGGGCATCGGATGACTTTTGGCCAAGAGATCCAGCATCCCACACAATTCACATAGCATCAGTTGCTTATAACACTGTCTTCCTTGGTGAATTTATGCAGCCAGATTGGGATATGTTTCATAGCGTACATCCAATGGCTGAATATCATGGAGCCGCACGAGCAATAGGAGGATGCCCTATTTATGTCAGTGACAAGCCCGGACACCACGACTTCAATCTTCTAAGAAAACTTGCACTGCCTGACGGTTCTATATTGAGGGCTAAGCTCCCAGGAAGACCAACAAAAGATTGTTTATTTTCTGATCCTGCTAGAGATGGAAAGAGCCTTCTGAAAATATGGAACCTGAATGATTTCTCTGGAATCGTGGGGGTGTTCAATTGTCAAGGAGCGGGATGGTGCAAAGTTGGAAAGCAAAACCTTATCCATGATGAGAATCCAGGAACAGTCACCGGCGTCGTTAGGGCTAAGGATGTTGACTATCTATCTAAGGTTGCTGATGAGAAATGGAATGGTGACGCCATTATATTTTCCCATGTTGGTGGAGAGGTTGCTTACCTTCCAAAGGATGCATCTATTCCTATTACATTGAAATCCAAAGAATTTGAAGTCTTCACTGTAGTTCCTATTAATGAAGTTAATGGTGGTGTCAAATTCGCTCCTATTGGTTTGATGAAGATGTTCAACTCTGGAGGAGCCATCAAGGAGTTAAATCGTTTTGTATCTAATGATGGAACTACTAAAAGTGTTGTCATGAAAGCACGAGGCTGTGGTTTATTCGGAGCTTATTCATCGGTTCGACCTAAGACAGTGAAAGTGGATTCAGAGGAGGTGGAGTTCAGATATGAGGAAGAATCTGGGCTGGTAACTATTGAGTTGAGAGTAGCAGAGAAAGAGTTGTACCAGTGGAACATTTCTATCAACTACTGA 2469 0.4475 MAVSAAGRLPLSAPVGLRGRRRLVGREWGLVKLKRNEQGGGCCKLNGRKRIISFSQTVASEAAQSQMTVGAGISVADASLVVLGKKVLTQVPQNVVVTPSSSILNGAFIGVDSDRKGSRRVFPIGKLQGLRFMCVFRFKMWWMTQRMGTHGLDIPFETQFLLVEAHKSSDIDGIRNGEEDTYAVFLPLLEGDFRAVLQGNAQNEIEICVESGCPDVEGFDGTHLVYVGAGSHPFEVISNAVKTVEKHLQTFSHRERKKMPDILNWFGWCTWDAFYTNVDSEGVKQGLQSLEQGGIPAKFVIIDDGWQSVGMDPNGIKWECDFAANFANRLTHMKENHKFQKDGKEGHREEDPALGLRHITEDIKEQHDIKHIYVWHAITGYWGGVKPGVTGMEHYESKMAYPVQSPGVESNQPDEALTTISKNGLGLVNPEKVFHFYNELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASIARNFPDNGIICCMSHNTDGLYSSKRSALVRASDDFWPRDPASHTIHIASVAYNTVFLGEFMQPDWDMFHSVHPMAEYHGAARAIGGCPIYVSDKPGHHDFNLLRKLALPDGSILRAKLPGRPTKDCLFSDPARDGKSLLKIWNLNDFSGIVGVFNCQGAGWCKVGKQNLIHDENPGTVTGVVRAKDVDYLSKVADEKWNGDAIIFSHVGGEVAYLPKDASIPITLKSKEFEVFTVVPINEVNGGVKFAPIGLMKMFNSGGAIKELNRFVSNDGTTKSVVMKARGCGLFGAYSSVRPKTVKVDSEEVEFRYEEESGLVTIELRVAEKELYQWNISINY 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1434 822 PANTHER - 67 819 IPR008811 -
Lele28g1434 822 Gene3D Aldolase class I 263 589 IPR013785 -
Lele28g1434 822 FunFam Probable galactinol--sucrose galactosyltransferase 1 263 590 - -
Lele28g1434 822 Pfam Raffinose synthase or seed imbibition protein Sip1 73 805 IPR008811 -
Lele28g1434 822 SUPERFAMILY (Trans)glycosidases 260 590 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1434 Lele-ChrLele28 10428777 10439841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1434 67 821 Glycoside Hydrolase AT1G55740 71.900 0.0 1119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1423 25 10361708 10364950 Lele28g1434 28 10428777 10439841 hybridization
Lele26g1450 26 10232490 10236978 Lele28g1434 28 10428777 10439841 hybridization