Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0665 ATGGAAAGAGATGGAGGTTGCTTTTGTAGCCTTCCGAAGATATGGAACCTGAATGATTTCTCCGGAGTCGTCGTGGTGTTCAATTGTCAAGGAGCGGGACGGTGCAAACTTGGAAAGCAAAACCTTATCCATGATGAGAATCCAGGAACAATCACCGGCGTCATTAGGGCTAAGGATGTTGATTATCTATCTAAGGTTGCTGATGAGAAATGGAATGGAGACACCATTATGTTTTCCCATGTTGGCGGTACCCTCCCAAGCTTTGACAAAGCGCTTATGCATATTCATGAGCTCGTCCTGGATTTTGAACTAGAGGTTACTTACCTTCCAAAAGATGCATCCATTCCTATTACATTGAAATCCAAAGAATTTGAATTCTTCACAGTTGTTTCTGCTAATGAAGTTAATGATGGTGTCAAATGTGCTCCTATTGGTTTGATGAAGATGTTCAACTCTGGAGGAGCCATCAAGGATTTAAATTGTGTTGTATCTAATTATGGAACTACTACAAGTGTTGTCATGAAAGCACGAGGCTGTTGTTTATTTGGAGCTTATTCATCGGCCCTAAGACAGTGA 576 0.4132 MERDGGCFCSLPKIWNLNDFSGVVVVFNCQGAGRCKLGKQNLIHDENPGTITGVIRAKDVDYLSKVADEKWNGDTIMFSHVGGTLPSFDKALMHIHELVLDFELEVTYLPKDASIPITLKSKEFEFFTVVSANEVNDGVKCAPIGLMKMFNSGGAIKDLNCVVSNYGTTTSVVMKARGCCLFGAYSSALRQ 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0665 191 Pfam Raffinose synthase or seed imbibition protein Sip1 10 188 IPR008811 -
Lele27g0665 191 PANTHER - 10 189 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0665 Lele-ChrLele27 14600072 14600847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0665 10 190 Glycoside Hydrolase AT1G55740 51.381 4.24e-52 176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1423 25 10361708 10364950 Lele27g0665 27 14600072 14600847 hybridization
Lele26g1450 26 10232490 10236978 Lele27g0665 27 14600072 14600847 hybridization