Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0782 ATGGCTTCTTCTCCTCCGTCGTATCAGACAGATCTTCCTCTGCCCGCGGCCTCTGAAATTGGTGACAAGCTTCCGGATCATGAAGATCGTTCAACTCCACTTCCAATCCATATTGTCACCAGTGCATCTCAACTTCCAGTTGAATTCCTCGAACCCTCACCTCAAAAGCAACTCGTCATTGGTTTCGACTGTGAGGGTGTCGACTTGTGTCGTTATGGGGCTCTCTGTGTAATGCAGAAAGAACCTAAGGGCACTTTTCTTGTTTTGTCGAGACAGAAAGCTGCTATAAAAATGTTTGGCCTTGAATGTCCTTTTGCATTCAGGACTCTCGATGAGTTCCTATCTTGTTTCTATGCTATCTACTTAGTTTTCATCTTCCTGCAGCTTGCATTTCCTGATGCTATATACCTGGTTGATGCAATCCAAGGGGGAGAGACGCTTATGAGAGCCTGCAAGCCTGCACTTGAGTCTAGTTACATAAAAAAAGTGGTTCATGATTGCAAACGAGACAGTGAGGCATTGTATTTTCAATTTGGCATCAAGTTGAACAACGTGATGGATACCCAGATTGCTTATTCACTGATAGAGGAGCAAGAAGGACGGAAGAGATTGCTGGATGACTACATTTCATTTGTTGGCCTCCTTGCAGATCCATATTATTGTGGTATGATGTATATCGTGGGTTTGAATGTAGGTATATCATATGATGAGAAAGAAGAAGTCCGTATCCTCCTTCGGCAGGACCCCAAGTTTTGGACATACAGGCCGTTATCTGAACAAATGGTCCGTGCAGCTGCTGATGATGTTTGCTTTCTTCTCTACATTTATCACCAGATGATGGAGAAATTAAATATGCGGTCTCTATGATTTCAACCGTTGAGGCCAGGAAATATGTTGACAGTTGATGGAGACGCTCCCGAGGAAGAAATCCTTTCAGTTCTTGATGTTCCCCAAGGAAAGATGGGACGCGTTATTGGGAGAAAAGGGGCGTCAATTTTGGCGCAAATTCTCATTGGAGGTGCGAAGGGCCCACCTGACAAGGTTTTTATCATGGGACCAGTGAAGCAGGTGAGGAAAGCCGAGGCCATGTTAAGGGGCAGAATGTTGGATGTGTACTGA 1119 0.4477 MASSPPSYQTDLPLPAASEIGDKLPDHEDRSTPLPIHIVTSASQLPVEFLEPSPQKQLVIGFDCEGVDLCRYGALCVMQKEPKGTFLVLSRQKAAIKMFGLECPFAFRTLDEFLSCFYAIYLVFIFLQLAFPDAIYLVDAIQGGETLMRACKPALESSYIKKVVHDCKRDSEALYFQFGIKLNNVMDTQIAYSLIEEQEGRKRLLDDYISFVGLLADPYYCGMMYIVGLNVGISYDEKEEVRILLRQDPKFWTYRPLSEQMVRAAADDVCFLLYIYHQMMEKLNMRSLXFQPLRPGNMLTVDGDAPEEEILSVLDVPQGKMGRVIGRKGASILAQILIGGAKGPPDKVFIMGPVKQVRKAEAMLRGRMLDVY 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0782 372 CDD Egl_like_exo 49 288 - -
Lele25g0782 372 SUPERFAMILY Ribonuclease H-like 126 284 IPR012337 -
Lele25g0782 372 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 307 370 IPR036612 GO:0003723
Lele25g0782 372 CDD KH-I 314 364 - -
Lele25g0782 372 Pfam 3'-5' exonuclease 118 283 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lele25g0782 372 PANTHER EGALITARIAN, ISOFORM B 20 79 - -
Lele25g0782 372 MobiDBLite consensus disorder prediction 1 32 - -
Lele25g0782 372 Gene3D - 2 293 IPR036397 GO:0003676
Lele25g0782 372 SMART 35exoneu6 86 284 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0782 Lele-ChrLele25 4982867 4986939 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0782 25 4982867 4986939 Lele27g1293 27 19702986 19707011 hybridization
Lele25g0782 25 4982867 4986939 Lele28g0782 28 4977797 4981782 hybridization