Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele25g0646 | ATGCACTCCAAAAGACTTCTACTTGCGCTTTTCCTGCAGCTATGCTTCTCGATTTTCTCCTCATCCTTCGCTCAAGCTACTGGGGCTGCTGAGGGTTACCCTATTAGTGGTCGAGTGAAGATTCCAAGTTTTGGAACAAAGGAATTTGGACTTCCTGGAAAAGTTTCAAATGTGAAGGTCATACTCAATAGTGGTCAAAGAGTTACATTTCTGAGACCTGATGGATATTTTTCATTCCACAATGTGACAGCAGGGACTCACCTGATTGAAGTTGCTGCCATAGGCTATTTCTTTTCTCCGGTACGAGTTGATGTTAGTGCTAGAAACCCAGGCAAAATTCATGCAGCTCTTACAGAGAGTAGGAAAGGGCTCAGTGAGTTTGTCTTGGAGCCATTAAGGGAGGAAATATATTATGAGATTAGGGAACCCTTTTCTATTATGTCCATTGTGAAAAGCCCAATGGGTCTGATGATGGGATTTATGCTGCTGGTTGTGTTCGTCATGCCCAAATTAATGGAGAATATGGATCCTGAAGAAATGAGGCGTGCCCAAGAAGAAATGAGAAATCAAGGAGTTCCATCATTGGCAAGCTTTTTACCTGGCGCTGGCGGCAGCAGCAGCTAA | 624 | 0.4375 | MHSKRLLLALFLQLCFSIFSSSFAQATGAAEGYPISGRVKIPSFGTKEFGLPGKVSNVKVILNSGQRVTFLRPDGYFSFHNVTAGTHLIEVAAIGYFFSPVRVDVSARNPGKIHAALTESRKGLSEFVLEPLREEIYYEIREPFSIMSIVKSPMGLMMGFMLLVVFVMPKLMENMDPEEMRRAQEEMRNQGVPSLASFLPGAGGSSS | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele25g0646 | 207 | Pfam | ER membrane protein complex subunit 7, beta-sandwich domain | 55 | 157 | IPR019008 | - | |
| Lele25g0646 | 207 | PANTHER | UNCHARACTERIZED | 7 | 202 | IPR039163 | - | |
| Lele25g0646 | 207 | SUPERFAMILY | Starch-binding domain-like | 30 | 110 | IPR013784 | GO:0030246 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele25g0646 | Lele-ChrLele25 | 4072802 | 4074685 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele25g0646 | 25 | 4072802 | 4074685 | Lele01g0654 | 01 | 3824588 | 3831107 | CCT | |
| Lele25g0646 | 25 | 4072802 | 4074685 | Lele02g0642 | 02 | 3839759 | 3842600 | CCT | |
| Lele25g0646 | 25 | 4072802 | 4074685 | Lele03g0654 | 03 | 3832895 | 3835894 | CCT | |
| Lele25g0646 | 25 | 4072802 | 4074685 | Lele04g0660 | 04 | 3989303 | 3992133 | CCT | |
| Lele01g0666 | 01 | 3879350 | 3881636 | Lele25g0646 | 25 | 4072802 | 4074685 | CCT | |
| Lele02g0650 | 02 | 3879486 | 3881987 | Lele25g0646 | 25 | 4072802 | 4074685 | CCT | |
| Lele03g0663 | 03 | 3887647 | 3890796 | Lele25g0646 | 25 | 4072802 | 4074685 | CCT | |
| Lele04g0668 | 04 | 4029115 | 4031405 | Lele25g0646 | 25 | 4072802 | 4074685 | CCT | |
| Lele25g0646 | 25 | 4072802 | 4074685 | Lele27g1440 | 27 | 20613523 | 20616312 | hybridization | |
| Lele25g0646 | 25 | 4072802 | 4074685 | Lele28g0642 | 28 | 4087793 | 4089660 | hybridization |