Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0654 ATGGATCCGCCTCAGACCCCAAATACAGATACCCAACGTCTCCTAACTCTGTTAGAAGCTCTCAAAGAAGCTTCCAAAGATCTTCAGGCCAATTCCATCCCCTTCCTCTTTAAGAATGACTCCAAGGTCGCCATTGAAGCTATTCTGGAGCTCGAAAGCAAGGCACTCGCCGTTTTCTCTGCCAATCCAGATCTTCAAAAGCTCTCTGAGTTGCTCCGTTCCCTCAGAACCTTAATCGAGAAGCTTCAGAAATATGAAGGTTTTGGGCTCCGATCGCTCCTCAACCGCCAAATCACTAATTACAAGATTTCCCGTGTTGCATATGATATTGAGTCCGAAATTCAAGCGTACGTTGATCGATTAACCATTGGAGGACTCGTCAAAACCCTGGTAGAATCGGCGAACGAGAACGTCCAGGTGAAGGCTTTGATTGGTTTTGAGAAAAGATTGTCGCGGGGTTTTGATATAGATTTTCAAGATTTGGTTTTAAAGGCCAAGGTATTCAATATTCTTGAGAATATACTCAGTGATCCGTCGATTTCAAAACGGGTTCGGGAACGAGCTGCCATGGCTATAGACGCTTTAGTTGGGTTCAACAAGAATGTATTTGTCGGATTGGTGCTAATGGGTCCAACGATTAAGTCCCTAATAGCAATGGCTTCAGGCCGTTCCATACAAGTTCTGTCATCTCTGATAAGGTTCATTAGAACCCCGTTGGTGGATGAAATTCTGGCAGTTGGAGAAATCCCAAGAATTATCAACCTTCTATGTTCGGACGATTTGTCGGTTCAAGTTGCAGCCTTGGATTGTGTCCTTGAACTTGCTTATATTGGTAGGGATGAAGTAATTGAAGCGATGCTGGAACAAGACCTGACTAAAAAGCTCATGGACTTGCAAAGAATGGATTGGCGTGACGAGAATGAGAGAGAGGTTTGTATAGGAACAGAGTCAGAATCCCAATCGAAGGATTTTCCATTTGCAAGTTGTGTTGCAAGGCGGATACAAAGATCTGGAAGAATTGTGCAGATCTTTGCAGTTCCTTTAGTTTCTTCAACTGCACATTGTTTGATTTGTGTTGGGTTGGAGATACAAGGCTGGATTATTTCTTATAGCGGTGTTGTAATTATATGGTTTTACCTCGGCCGAAGTCACGCAGAGCAGTGGAAGGCAGAAGACTCTGAACTAGAACTGGTCAGTATAGCTCCAAAAGATGGAAATTTAGACCTCTCAAATCTTGCAGAAGGAGAGCCATTGGTAGCGAAATATGATGATGCTAATTTGGTAAATGTACAGAACGAACCCACGACGAGGCAGATTGCTTTGAATGGGTTTTCCATTGCACCTATCTGGTTTACTACTGAGTATCTATCAAATGCTGCCCTTGCACGCACTAGCGTCGCTAGCACAATAGTATTATCATCTACTTCTGGAATTTTTACTCTTTTCATTGGTTTAAGGGTTGATGTGCAAAAGCTGTTTGGATATATCGGATTGTTTACGCTAGTAGCGCTATGGTGGCTTGTCTGGCCTTTGATGGCCATAGGAATTGAACCTGAGTTTAAGATTCCCCACTCTGCTAGCACGGATGAAGTGGTCTTGCCAATGGATTTATTGGCAGCGTACTGTCAGATTACGTGTGGCTTTGTGATAGCTAATATGGCAGATTGGTGCACGAACAAGTTGGGAGTATGA 1692 0.4344 MDPPQTPNTDTQRLLTLLEALKEASKDLQANSIPFLFKNDSKVAIEAILELESKALAVFSANPDLQKLSELLRSLRTLIEKLQKYEGFGLRSLLNRQITNYKISRVAYDIESEIQAYVDRLTIGGLVKTLVESANENVQVKALIGFEKRLSRGFDIDFQDLVLKAKVFNILENILSDPSISKRVRERAAMAIDALVGFNKNVFVGLVLMGPTIKSLIAMASGRSIQVLSSLIRFIRTPLVDEILAVGEIPRIINLLCSDDLSVQVAALDCVLELAYIGRDEVIEAMLEQDLTKKLMDLQRMDWRDENEREVCIGTESESQSKDFPFASCVARRIQRSGRIVQIFAVPLVSSTAHCLICVGLEIQGWIISYSGVVIIWFYLGRSHAEQWKAEDSELELVSIAPKDGNLDLSNLAEGEPLVAKYDDANLVNVQNEPTTRQIALNGFSIAPIWFTTEYLSNAALARTSVASTIVLSSTSGIFTLFIGLRVDVQKLFGYIGLFTLVALWWLVWPLMAIGIEPEFKIPHSASTDEVVLPMDLLAAYCQITCGFVIANMADWCTNKLGV 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0654 563 Coils Coil 11 31 - -
Lele01g0654 563 SUPERFAMILY ARM repeat 125 314 IPR016024 -
Lele01g0654 563 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 9 332 - -
Lele01g0654 563 Coils Coil 65 85 - -
Lele01g0654 563 Gene3D - 95 312 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0654 Lele-ChrLele01 3824588 3831107 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0646 25 4072802 4074685 Lele01g0654 01 3824588 3831107 CCT
Lele26g0658 26 4173524 4175393 Lele01g0654 01 3824588 3831107 CCT
Lele27g1440 27 20613523 20616312 Lele01g0654 01 3824588 3831107 CCT
Lele01g0654 01 3824588 3831107 Lele03g0654 03 3832895 3835894 hybridization
Lele01g0654 01 3824588 3831107 Lele04g0660 04 3989303 3992133 hybridization