Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0642 ATGCACTCCAAAAGACTTCTACTTGCGCTTTTCCTGCAGTTATGCTCTTCGATTTTCTGCTCATCCTTCGCTCAAGCTACTGGGTCTGCTGAGGGTTACCCTATTAGTGGTCGAGTGAAGATTCCAAGTTTTGGAACAAAGGAATTTGGACTTCCTGGAAAAGTTTCAAATGTGAAGGTCATACTCAATGGTGGTCAAAGAGTTACATTTCTGAGACCAGATGGATATTTTTCATTCCACAATGTGACAGCAGGGACTCACCTGATTGAAGTTGCTGCCATAGGCTATTTCTTTTCTCCGGTACGAGTTGATGTTAGTGCTAGAAACCCAGGCAAAATTCATGCGGCTCTTACAGAGAGTAGGAGAGGGCTCAGTGAGTTTGTCTTGGAGCCATTAAGGGAGGAAATATATTATGAGATTAGGGAACCCTTTTCTATCATGTCCGTTGTTAAAAGCCCAATGGGTCTGATGATGGGATTTATGCTGCTTGTTGTGTTCGTCATGCCCAAATTAATGGAGAATATGGATCCTGAAGAAATGAGGCGTGCCCAAGAAGAAATGAGAAATCAAGGAGTTCCATCATTGGCAAGCTTTTTACCTGGCGCTGGTAGCAGCAGCTAG 621 0.4364 MHSKRLLLALFLQLCSSIFCSSFAQATGSAEGYPISGRVKIPSFGTKEFGLPGKVSNVKVILNGGQRVTFLRPDGYFSFHNVTAGTHLIEVAAIGYFFSPVRVDVSARNPGKIHAALTESRRGLSEFVLEPLREEIYYEIREPFSIMSVVKSPMGLMMGFMLLVVFVMPKLMENMDPEEMRRAQEEMRNQGVPSLASFLPGAGSSS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0642 206 SUPERFAMILY Starch-binding domain-like 31 110 IPR013784 GO:0030246
Lele28g0642 206 Pfam ER membrane protein complex subunit 7, beta-sandwich domain 55 157 IPR019008 -
Lele28g0642 206 PANTHER UNCHARACTERIZED 7 202 IPR039163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0642 Lele-ChrLele28 4087793 4089660 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0666 01 3879350 3881636 Lele28g0642 28 4087793 4089660 CCT
Lele02g0650 02 3879486 3881987 Lele28g0642 28 4087793 4089660 CCT
Lele03g0663 03 3887647 3890796 Lele28g0642 28 4087793 4089660 CCT
Lele04g0668 04 4029115 4031405 Lele28g0642 28 4087793 4089660 CCT
Lele25g0646 25 4072802 4074685 Lele28g0642 28 4087793 4089660 hybridization
Lele26g0658 26 4173524 4175393 Lele28g0642 28 4087793 4089660 hybridization