Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0431 ATGGCAGCTGTTTCCGATGAAGCCACCAATATTTGTAGTCATTGCAATCGATCTATCCCTGCAGCAAATATTGATTTGCATTATGCCCATTGCTCCCGGAACCTTGAAAAATGCAAGTTTTGCGGTGATATGATTCCCAAAAAAAATGCTGAGGAGCACTACTTAAGCACTCATGCTCCGGTCGCCTGTTCAATGTGCAGTGAGACGATGGACCGTGATATTTTAGATGTCCATAAAGGTGAAAATTGCCCTCAAAGAATTGTTACTTGTGAATTTTGCGAGTTCCCATTGCCAGCGATTGATCTGGCTGAGCATCAGGAAGTCTGTGGGAATCGAACAGAACTCTGTCACCTTTGTGACAAATATGTCAGATTACGTGAAAGATACTACCATGAAGCTAGCTGCAATGGCATCCCAGATCATACTGCTACAGTAGGATCTTCAAGGGATGTGAGGGAAGCTGAAAGAGAGGATAACGCTAGAAGAAGGCAGCGGAACAACTTCTCAAGGAGACGTCTTCTTTTCACAATAGCAATCACTAGCATTGCTGTCTTGTTAGGATCTCTGTTTTTCCAGAAGAAGACTCAGCAAAGTGATGTGAATTAG 606 0.4323 MAAVSDEATNICSHCNRSIPAANIDLHYAHCSRNLEKCKFCGDMIPKKNAEEHYLSTHAPVACSMCSETMDRDILDVHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCDKYVRLRERYYHEASCNGIPDHTATVGSSRDVREAEREDNARRRQRNNFSRRRLLFTIAITSIAVLLGSLFFQKKTQQSDVN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0431 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 58 IPR013083 -
Lele25g0431 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 111 IPR013083 -
Lele25g0431 201 Pfam TRAF-type zinc finger 59 105 IPR001293 GO:0008270
Lele25g0431 201 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0431 Lele-ChrLele25 2684110 2687712 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0431 25 2684110 2687712 Lele27g1652 27 22028548 22031964 hybridization
Lele25g0431 25 2684110 2687712 Lele28g0436 28 2759440 2770264 hybridization