Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1652 ATGGAAGCTGTTTCCGATGAAGCCACCAATATTTGTAGTCATTGCAATCGATCTATCCCTGCAGCAAATATTGATTTGCATTATGCCCATTGCTCCCGGAACCTTGAAAAATGCAAGGTTTGCGGTGATATGATTCCCAAAAAAAATGCTGAGGAGCACTACTTAAGCACTCATGCTCCGGTCGCCTGTTCAATGTGCAGTGAGACGATGGACCGTGATATTTTAGATGTCCATAAAGGTGAAAATTGCCCTCAAAGAATTGTTACTTGTGAATTTTGCGAGTTCCCATTGCCAGCGATTGATCTGGCTGAGCATCAGGAAGTCTGTGGGAATCGAACAGAACTCTGTCACCTTTGTGACAAATATGTCAGATTACGTGAAAGATACAACCATGAAGCTAGCTGCAATGGCATCCCAGATCATACTGCTACTGTAGGATCTTCAAGGGATGTGAGGGAAGCTGAAAGAGAGGATAACGCTAGAAGAAGGCAGCGGGACAACTTCTCAAGAAGACGTCTTCTTTTCACAATAGCAATCACTAGCATTGCTGTCTTCTTAGGATCTCTGTTTTTCCAGAAGAAGACTGAGCAAAGTGATGTGAATTAG 606 0.4323 MEAVSDEATNICSHCNRSIPAANIDLHYAHCSRNLEKCKVCGDMIPKKNAEEHYLSTHAPVACSMCSETMDRDILDVHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCDKYVRLRERYNHEASCNGIPDHTATVGSSRDVREAEREDNARRRQRDNFSRRRLLFTIAITSIAVFLGSLFFQKKTEQSDVN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1652 201 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 1 197 - -
Lele27g1652 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 111 IPR013083 -
Lele27g1652 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 57 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1652 Lele-ChrLele27 22028548 22031964 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0431 25 2684110 2687712 Lele27g1652 27 22028548 22031964 hybridization
Lele26g0442 26 2777167 2782856 Lele27g1652 27 22028548 22031964 hybridization