Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0323 ATGTTATCTAGCTCTGATGAGGAGAGTCCAAGATTAATTCCAAATCTTCCTGATGAGTTATCACTTCAGATTATCGCCAGAGTTCCTAGTATTTGCTACTTCAACATGAGGTTGGTATCAAGAAAGTGGAAGGCTACCATCATGAGTTCTGAACTATATAAATTCAGAAAAGAACTTGGAACGACTGAAGAGTGGCTATATCTGTTGATTAAGGTTGGAGAGAATAAGCTTATATGGCATGCCTTAGACCCTCGTTCCCAGAAATGGCAGAGACTGCCTGCTATGCCCAATTTTATTAATGAAGAAGAATCTAGAAAGGGTTCTTCTAGGCTTTGGATGTGGAACATGGTGGAAGGTATTCGAATTGCTGAAGTTATAAGAGGTTTCTGGGACAGAAAGATGCGTTGGATGAAATGCTCTTTTGCAGTTGTGCCATTGCAGCTGTTTAGGGATGTCTCTTTGTTCTAG 468 0.4038 MLSSSDEESPRLIPNLPDELSLQIIARVPSICYFNMRLVSRKWKATIMSSELYKFRKELGTTEEWLYLLIKVGENKLIWHALDPRSQKWQRLPAMPNFINEEESRKGSSRLWMWNMVEGIRIAEVIRGFWDRKMRWMKCSFAVVPLQLFRDVSLF 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0323 155 Pfam F-box domain 14 53 IPR001810 GO:0005515
Lele25g0323 155 SUPERFAMILY F-box domain 7 79 IPR036047 GO:0005515
Lele25g0323 155 ProSiteProfiles F-box domain profile. 10 56 IPR001810 GO:0005515
Lele25g0323 155 Gene3D - 11 66 - -
Lele25g0323 155 PANTHER OS02G0202900 PROTEIN 9 98 IPR045887 -
Lele25g0323 155 SMART fbox_2 16 56 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0323 Lele-ChrLele25 1952148 1952615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0323 16 100 Miscellaneous Gene Families AT4G33900 35.556 2.20e-08 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0323 25 1952148 1952615 Lele27g1762 27 22783494 22787640 hybridization
Lele25g0323 25 1952148 1952615 Lele28g0337 28 2043328 2044755 hybridization