Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0337 ATGGGTTCCTTTTTTAGCATGGCGAATACCAAATCCGATACAAGTGAGGGCGATGAGGTCTTTCAGAATGAGATCCGCAAGAGGAGAAGAATGTCATCTAGTTTCGATGAGGAGACTCCAAGATTAATTCCAAATCTTCCTGATGAGTTATCACTTCAGATTATTGCCAGAGTTCCTAGAATTTGCTATTTCAACATGAGGTTGGTGTCAAGGAAGTGGAAGGCTACCATCATGAGTTCAGAACTATATAAATTAAGAAAAGAACTGGGAACAACTGAAGAGTGGCTATATCTGTTGATCAAAGTTGGAGAAAATAAGCTTATATGGCATGCCTTAGACCCTCGTTCCCAGAAATGGCAGAGACTGCCTGCTATGCCCAATTTTATTAATGAAGAAGAATCTAGAAAGGGTTCTTCTAGGCTTTGGATGTGGAACATGGTGGAAGGTATTAGAATTGCCGAAGTTATAAGAGGTTTGCTGGGACAGAAAGATGCATTAGATGAAATGCCCTTTTGCGGTTGTGCCATTGGAGCCGTTGAGGGATATCTCTACGTTCTAGGTGGATTCTGTAAATCTTCAACGATGAGATGTGTTTGGCGATACGATCTGATACAAAACAGATGGAGCAAGGTGACTTCTATGTCTACAGGTAGGGCATATTGCAAGACAGGCATCTTAAATAACAAGCTTTATGTGGTTGGAGGGGTTAGTCAGGGACAAGCTGGATTGATTCCTCTTCAGTCTGCTGAAGTTTTTGATCCCTCTACAGATACATGGTCCAATGTACCTAGTATGCCTTTCTCCAAAGCTCGAGTCCTGCCCACTGCTTTTTTGGCTGACATGTTGAAGCCTATTGCCACAGGATTGACCTCGTACATGGGAAGGTTGTGTGTCCCACAAAGTTTGTATTCATGGCCCTTTTTTGTTGATGTAGGTGGAGAAATTTATGATCCTGAATCAAATTCGTGGATGGAAATGCCTACTGGAATGGGTGAGGGCTGGCCTGCTCGGCAAGTAGGCACCAAATTGAGTGTTGTGGTGGATGGTGAATTATATGCTTTTGATCCGTCTAATTCTCTGGAAAGTGGAAAGATCAAGGTATATGATCAAGGAGAAGATTCATGGAAAGTAGTTATCGGAAAAGTCCCCGTATATGATTCTGCAGATTCAGAGTCTCCATATTTGCTCACTGGTTTCCATGGAAAAATTCACGTCCTTACAAAAGATGCCAATCATCATATTGCTGTTCTTAAGGCTGACCTGCGCAGTAATTTGGATTGTTCTCCTTCAATCTCATCTCTTTCACCCATCTGTAACCATGAAGTTCCAGAACCAGGAGCTGAATCTGATGCAGTTGTTTGGAAGGTAGTTGCCAAGAGGGATTTTGGGCCAGCTGAATTGGTCAGTTGCCAAGTGATTGATATTTAG 1428 0.4244 MGSFFSMANTKSDTSEGDEVFQNEIRKRRRMSSSFDEETPRLIPNLPDELSLQIIARVPRICYFNMRLVSRKWKATIMSSELYKLRKELGTTEEWLYLLIKVGENKLIWHALDPRSQKWQRLPAMPNFINEEESRKGSSRLWMWNMVEGIRIAEVIRGLLGQKDALDEMPFCGCAIGAVEGYLYVLGGFCKSSTMRCVWRYDLIQNRWSKVTSMSTGRAYCKTGILNNKLYVVGGVSQGQAGLIPLQSAEVFDPSTDTWSNVPSMPFSKARVLPTAFLADMLKPIATGLTSYMGRLCVPQSLYSWPFFVDVGGEIYDPESNSWMEMPTGMGEGWPARQVGTKLSVVVDGELYAFDPSNSLESGKIKVYDQGEDSWKVVIGKVPVYDSADSESPYLLTGFHGKIHVLTKDANHHIAVLKADLRSNLDCSPSISSLSPICNHEVPEPGAESDAVVWKVVAKRDFGPAELVSCQVIDI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0337 475 SUPERFAMILY Kelch motif 98 405 IPR015915 GO:0005515
Lele28g0337 475 MobiDBLite consensus disorder prediction 1 23 - -
Lele28g0337 475 Gene3D - 104 384 IPR015915 GO:0005515
Lele28g0337 475 PANTHER OS02G0202900 PROTEIN 22 474 IPR045887 -
Lele28g0337 475 MobiDBLite consensus disorder prediction 1 16 - -
Lele28g0337 475 Pfam F-box domain 44 83 IPR001810 GO:0005515
Lele28g0337 475 SUPERFAMILY F-box domain 40 110 IPR036047 GO:0005515
Lele28g0337 475 SMART kelc_smart 229 279 IPR006652 GO:0005515
Lele28g0337 475 SMART kelc_smart 182 228 IPR006652 GO:0005515
Lele28g0337 475 Gene3D - 41 96 - -
Lele28g0337 475 ProSiteProfiles F-box domain profile. 40 86 IPR001810 GO:0005515
Lele28g0337 475 SMART fbox_2 46 86 IPR001810 GO:0005515
Lele28g0337 475 Pfam Kelch motif 218 266 IPR006652 GO:0005515
Lele28g0337 475 Pfam Kelch motif 170 215 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0337 Lele-ChrLele28 2043328 2044755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0337 46 270 Miscellaneous Gene Families AT4G33900 25.431 2.68e-10 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0323 25 1952148 1952615 Lele28g0337 28 2043328 2044755 hybridization
Lele26g0335 26 2013969 2015396 Lele28g0337 28 2043328 2044755 hybridization