Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1762 ATGGGCATAATTAGCTACTTGTTGTCGTCCAAGGAAGAGCTCTCTTTGAAAAATACAAAGCAGTCTTCTGCAGGTCACACTGAAGATGATCCGATCAAAGTAGGACTAAAAACCCTAATTAATCCTTCCCCTCACGCTCCCCGCATTGTACATTCTCATACTGGCTATACTGTCTCCACAGCATGGAAGCCACGGCCGCCGCCATTGTCGATGTTCCGTTCGCGTGTGACGGACGATGTTATTGGGACCGAGAGTGGTGATTACATGAGCTCTAGTGTGGAAGATTTAAAAGGCTTGGTGGACAAAGCTGAACCTCACCGTAATCGCACCAGGTCCAGATACAGGAAAGCCGAGATGAGAGAGCTCCCACAACCCATATCTCTACTGAGGCCGGCGAGTGGAATGCCGTGGGTTTTTAGGAGGGAGAACATTGATGGAACGCTCATCATGAGAGCAGAGAGAATGAAGCGCCATGAATGTTTTGAAGCTCGGCGACTGAATGGGAGGCTCACTATGACGCTCGTCCCAAGTGGAGACGACACCGTTTACTGTGAAGATTGCGGTCACCCCATCACCGAGCAATTGGAAGATGGTCAAGATATGGAGGGTGAAGGTTTTGATGAGCAAGAGGAGGTGGAGAGTGATGAGGCTGAGGAATGTGAGGAGGTACGTGAGTGCATCGGGGGGGAGGAAGGGTCGGTTCGGGAATTGGACCTGTTCTGGAAGGGCAAAGGCTTGGATGGGCCCAGCGGGGAAAGTCATGGTGGATTGGACCGAATCCAGGCCCGCAAGAATCAAAGGTCCTCTAGAAGCAAGTCACTGGAGATCCCCACAGACCTGCAAGAATCAAAGGCTCTGCGTTCCAAAATTGAATCGTCTCTGTCAGTTTCACAGCGTCGAAGTTTTCCGTCGAGAATAGCTTTTTCTTCTCTTCTCTTTTCATTGATTCACTGTGCCACTTACTTATACTGCGTTCGACAAGTTTTAACTGAGCCCAGCATGGCGAATACCAAATCCGATACAAGTGAGGGTGATGATGTCTTTCAGAATGAGATCTGCAAGAGGAGAAGAATGTTATCTAGCTTTGATGAGGAGAGTCCAAGATTAATTCCAAATCTTCCTGATGAGTTATCACTTCAGATTATCGCCAGAGTTCCTAGAATTTGCTACTTCAACATGATGTTGGTGTCAAGAAAGTGGAAGGCTACCATCATGAGTTCTGAACTATATAAATTAAGAAAAGAACTTGGAACGACTGAAGAGTGGCTATATCTGTTGATCAAGGTTGGAGAGAATAAGCTTATATGGCATGCCTTAGACCCTCGTTCCCAGAAATGGCAGAGACTGCCTGCTATGCCCAATTTTATTAATGAAGAAGAATCTAGAAAGTGTTCTTCTAGGCTTTGGATGTGGAACATGGTAGAATGTATTCGAATTGCTGAAGTTATAAGAGGTTTGCTGGGACAGAAAGATGCATTAGATGAAATGCCCTTTTGCGGTTGTGCCATTGGAGCTGTTGAGGGATGTAGGGCATATTGCAAGACAGGCATCTTAAATAACAAGCTTTATGTGGTTGGAGGGGTTAGTCAGGGACAAGCTGGATTGATTCCTCTTCAGGCTGCTGAAGTTTTTGATCCCTCTACAGATACATGGTCCAATGTACCTAGCGGAGAAATCTATGATCCTGAAACAAATTCGTGGATGGAAATGCCTACTGGAATGGGTGAGGGTTGGCCTGCTCGGCAAGTAGATGCAGAGTCTCCATATTTGCTCACTGGCTTCCATGGGAAAATTCACGTCATTACTAAAGAGGCCAATCATGACATTGCTGTTCTCAAGGCTGACCTGCGCAGTAATTTGGATTCTTCTCCTTCAATCTCGTCTCTTTCACCCATCTGTAGTCATGAAGTTCCAGAACCAGGAGCTGAATCTGACGCAGTTGTTTGGAAGATAGTTGCCAAGAGGGATTTTGGGCCAGCCGAATTGGTCAGTTGCCAAGTGATTGATATTTAG 2013 0.464 MGIISYLLSSKEELSLKNTKQSSAGHTEDDPIKVGLKTLINPSPHAPRIVHSHTGYTVSTAWKPRPPPLSMFRSRVTDDVIGTESGDYMSSSVEDLKGLVDKAEPHRNRTRSRYRKAEMRELPQPISLLRPASGMPWVFRRENIDGTLIMRAERMKRHECFEARRLNGRLTMTLVPSGDDTVYCEDCGHPITEQLEDGQDMEGEGFDEQEEVESDEAEECEEVRECIGGEEGSVRELDLFWKGKGLDGPSGESHGGLDRIQARKNQRSSRSKSLEIPTDLQESKALRSKIESSLSVSQRRSFPSRIAFSSLLFSLIHCATYLYCVRQVLTEPSMANTKSDTSEGDDVFQNEICKRRRMLSSFDEESPRLIPNLPDELSLQIIARVPRICYFNMMLVSRKWKATIMSSELYKLRKELGTTEEWLYLLIKVGENKLIWHALDPRSQKWQRLPAMPNFINEEESRKCSSRLWMWNMVECIRIAEVIRGLLGQKDALDEMPFCGCAIGAVEGCRAYCKTGILNNKLYVVGGVSQGQAGLIPLQAAEVFDPSTDTWSNVPSGEIYDPETNSWMEMPTGMGEGWPARQVDAESPYLLTGFHGKIHVITKEANHDIAVLKADLRSNLDSSPSISSLSPICSHEVPEPGAESDAVVWKIVAKRDFGPAELVSCQVIDI 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1762 670 MobiDBLite consensus disorder prediction 246 280 - -
Lele27g1762 670 PANTHER OS02G0202900 PROTEIN 349 458 IPR045887 -
Lele27g1762 670 Gene3D - 432 575 IPR015915 GO:0005515
Lele27g1762 670 Pfam F-box domain 371 410 IPR001810 GO:0005515
Lele27g1762 670 Pfam Kelch motif 510 556 IPR006652 GO:0005515
Lele27g1762 670 SUPERFAMILY Kelch motif 425 572 IPR015915 GO:0005515
Lele27g1762 670 SMART fbox_2 373 413 IPR001810 GO:0005515
Lele27g1762 670 SUPERFAMILY F-box domain 364 413 IPR036047 GO:0005515
Lele27g1762 670 Pfam Fantastic Four meristem regulator 122 174 IPR046431 -
Lele27g1762 670 ProSiteProfiles F-box domain profile. 367 413 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1762 Lele-ChrLele27 22783494 22787640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1762 363 559 Miscellaneous Gene Families AT4G33900 24.779 4.31e-08 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0323 25 1952148 1952615 Lele27g1762 27 22783494 22787640 hybridization
Lele26g0335 26 2013969 2015396 Lele27g1762 27 22783494 22787640 hybridization