Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1765 ATGGTCTCTGATCCAATCACAACCGCTCCTATTCCTTCAGCTGCAAACGCTAAGAATCTGGGCAAGAAAAGAAGGACCAACAGGTCTGCAAAATTAAGGCAATGTAAGATTGATGCCCGTCGCGAGCAGTGGCTTTCTCAAGGTAAGGACGTTATGGTCAAGAATAAGAATTGCAAGGACGGAGGGGACGATGTTCACGCGCCCTCGATGCCTGTTGGGGAAGACAACAAACGTTCATGGGAGAAATTGGAGATGAGTCCTAGAGCTGAAGAGATTGATGGATTGATCCATCAAGATGGTTATATGGAATCTCTATCCAATAGTCCCTCCAGTGTTGATAGTAGCATGTTGGGGAGTAATGATTCGGGAACAAATTTCACTGGGAGCAGCAGTAGCAGCGGTAGCAGTGCTGGGTCCTTCTCCGGCAATGTCACGGAAGAAGAAGGCGGTGATGATTGCTTGGATGATTGGGAGGCTGTGGCTGATGCTTTAGCTGCCGATGACCAGCATCAAAATCCATGTTCGGAGCTGCCCACCACTCATGAAACAGTTGTGCAAATGGTTTCGCCCCATGAAATGACTCATGGGTCGAATTTAGGTGCACCGAATTCTAAAACCGAGAGTGATAGAATAGTTCCATCGGCCTCTGGCAATAGCAGAGCTTGGAGGCCTGATGATGCATTTCGTCCTCAGAGTCTTCCTAATCTATCTAAGCAGTATAGTTTACCAAATACAGGCTCTCGTAGTGGAGGTGGGATCCCATGGGCTCGCCCTACTGCGCCATCCTCTTGCCCAATATGCTGTGAGGATCTTGACTTGACAGATTCATGTTTTTTACCCTGCTTGTGTGGATTTCGGCTTTGCCTCTTCTGTCACAAGAGGATTCTTGAGCAGGATGGCCGCTGCCCTGGGTGCAGGAAGCCTTATGATTGCAAATCTGTTGAGCCAGAGGCAAACATCCAGGGAGGCAGCCCGACTCTTCGTTTGGAGCGCTCACATAGCATGATTTATAGGACATAG 1020 0.4873 MVSDPITTAPIPSAANAKNLGKKRRTNRSAKLRQCKIDARREQWLSQGKDVMVKNKNCKDGGDDVHAPSMPVGEDNKRSWEKLEMSPRAEEIDGLIHQDGYMESLSNSPSSVDSSMLGSNDSGTNFTGSSSSSGSSAGSFSGNVTEEEGGDDCLDDWEAVADALAADDQHQNPCSELPTTHETVVQMVSPHEMTHGSNLGAPNSKTESDRIVPSASGNSRAWRPDDAFRPQSLPNLSKQYSLPNTGSRSGGGIPWARPTAPSSCPICCEDLDLTDSCFLPCLCGFRLCLFCHKRILEQDGRCPGCRKPYDCKSVEPEANIQGGSPTLRLERSHSMIYRT 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1765 339 MobiDBLite consensus disorder prediction 101 152 - -
Lele24g1765 339 CDD mRING-HC-C4C4_CNOT4 264 307 IPR039515 -
Lele24g1765 339 MobiDBLite consensus disorder prediction 1 32 - -
Lele24g1765 339 Pfam RING/Ubox like zinc-binding domain 264 310 - -
Lele24g1765 339 FunFam RING/U-box superfamily protein 257 322 - -
Lele24g1765 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 321 IPR013083 -
Lele24g1765 339 MobiDBLite consensus disorder prediction 193 225 - -
Lele24g1765 339 MobiDBLite consensus disorder prediction 193 215 - -
Lele24g1765 339 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 260 318 IPR039780 GO:0004842|GO:0030014
Lele24g1765 339 ProSiteProfiles Zinc finger RING-type profile. 264 306 IPR001841 -
Lele24g1765 339 SUPERFAMILY RING/U-box 261 316 - -
Lele24g1765 339 MobiDBLite consensus disorder prediction 101 143 - -
Lele24g1765 339 MobiDBLite consensus disorder prediction 55 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1765 Lele-ChrLele24 22816803 22818041 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1765 24 22816803 22818041 Lele24g1765 24 22816803 22818041 ECH
Lele21g1829 21 25847991 25849229 Lele24g1765 24 22816803 22818041 hybridization
Lele22g1804 22 23158641 23160062 Lele24g1765 24 22816803 22818041 hybridization