Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1804 ATGGAGAACTACCGCGATTCGTTTCTGAAGAGCTATCCAACCATGGTTTCTGATCCAATCACAACCGCTCCTATTCCTTCAGCTGCAAACGCTAAGAATCTGGGCAAGAAAAGAAGGACTAACAGGTCTGCAAAATTAAGGCAATGTAAGATTGATGCCCGTCGTGAGCAGTGGCTTTCTCAAGTTATGGTGAAGAATAATAATTGCAAGGACGGAGTGGACGGTGTTCACGCGCCCTCGATACCTGTTGGGGAAGACAACAAACGTTCATGGGAGAAATTGGAGATGAGTCCTAGAGCTGAAGAGATTGATGGATCGATCCATCAAGATGGTTATATGGAATCTCTATCCAATAGTCCCTCCAGTGTGGATAGTAGCATGTTGGGGAGTAATGATTTGGGAACAAATTTCACTGGGAGCAGCAGTAGCAGCGGTAGCAGTGCTGGGTCCTGCTCCGGCAATGTCACGGAAGAAGAAGGCGATGATGATTGCTTGGATGATTGGGAGGCTGTGGCTGATGCTTTAGTTGACGATGACAAGCATCAAAATCCATGTTCGGAGCTGCCCACCACTCATGAAACAGTTGTGCAAATGGTTTCTCCCCATGAAATGATTCATGGGTCGAATTTAGGTGCATCGAATTCTAAAACCGAGAGTGATAGAATAGTTCCATCGGCCTCTGGCAATAGCAGAGCTTGGAGGCCTGATGATGCATTTCGTCCTCAGAGTCTTCCTAATCTATCTAAGCAGTATAGTTTACCAAATACAGGCTCTCGTAGTGGAGGTGGGATCCCATGGGCTCGCCCTACTGCGCCATCCTCTTGCCCAATATGCTGTGAGGATCTTGACTTGACAGATTCATGTTTTTTACCCTGCTTGTGTGGATTTCGGCTTTGCCTCTTCTGTCACAAGAGGATTCTTGAGCAGGATGGCCGCTGTCCTGGGTGCAGGAAGCCTTATGATAGCAAATCTGTTGAGCCAGAGGCAAACATCCAGGGAGGCAGCCTGACTCTTCGTTTGGAGCGCTCGCGTAGCATGATTTATAGGACATAG 1053 0.4767 MENYRDSFLKSYPTMVSDPITTAPIPSAANAKNLGKKRRTNRSAKLRQCKIDARREQWLSQVMVKNNNCKDGVDGVHAPSIPVGEDNKRSWEKLEMSPRAEEIDGSIHQDGYMESLSNSPSSVDSSMLGSNDLGTNFTGSSSSSGSSAGSCSGNVTEEEGDDDCLDDWEAVADALVDDDKHQNPCSELPTTHETVVQMVSPHEMIHGSNLGASNSKTESDRIVPSASGNSRAWRPDDAFRPQSLPNLSKQYSLPNTGSRSGGGIPWARPTAPSSCPICCEDLDLTDSCFLPCLCGFRLCLFCHKRILEQDGRCPGCRKPYDSKSVEPEANIQGGSLTLRLERSRSMIYRT 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1804 350 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 271 325 IPR039780 GO:0004842|GO:0030014
Lele22g1804 350 Pfam RING/Ubox like zinc-binding domain 275 321 - -
Lele22g1804 350 ProSiteProfiles Zinc finger RING-type profile. 275 317 IPR001841 -
Lele22g1804 350 SUPERFAMILY RING/U-box 272 327 - -
Lele22g1804 350 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 332 IPR013083 -
Lele22g1804 350 MobiDBLite consensus disorder prediction 111 154 - -
Lele22g1804 350 MobiDBLite consensus disorder prediction 100 162 - -
Lele22g1804 350 MobiDBLite consensus disorder prediction 209 236 - -
Lele22g1804 350 MobiDBLite consensus disorder prediction 209 226 - -
Lele22g1804 350 CDD mRING-HC-C4C4_CNOT4 275 318 IPR039515 -
Lele22g1804 350 FunFam RING/U-box superfamily protein 268 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1804 Lele-ChrLele22 23158641 23160062 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1804 22 23158641 23160062 Lele22g1804 22 23158641 23160062 ECH
Lele22g1804 22 23158641 23160062 Lele23g0181 23 1162093 1163331 hybridization
Lele22g1804 22 23158641 23160062 Lele24g1765 24 22816803 22818041 hybridization