Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1680 ATGGACTTCGGTTTCGGGGCCTCTACAATGTATGCTGCTCAGCATATCTCTGCTGTCCAAGCTGCTTGCCTTCACTCTGATAATTATATGGCACTTTATGACTCGGATGGAGATGATGATGCCCGGTCATATTTCCCTTGTCCTTTCTGTTGTGTGGAAATTGAAGTTCCTGTTCTCTGTAGCCATCTGCAAAAGGAGCATTGCTTTGACCTAAAAAATGCTGTTTGTCCTCTGTGTGCAGCAAATTTAGGGAAGGATGCGATCAGACATTTTATAGTACAACATTCAAGTTCACTGAAGAGAAGGTGGAAAACTGATAAATCCAACATCTGGTCTAATAATTCAGCCATGCTTCAAAAGAAACTGTCTGCAAATACAAGAGTAAACCAACATGAGTCAACGCCTGATCCTCTTTTGTCACCATTTATCTGCAACGTAGCTGTTCCAACCCCTAACAGCATTCATCAAGACAAACATTCCAACAGCAATGCCTCAGTCATTTCTGCTGCAAAAAGTAATGGGAGAGAAGCAAGAGTTGTGGGTGAACCGGGAGATCACGAAGATAGAAGGCAGCGGGCAGCATTTGTGCAACAGTTGGTAGCATCAACCATATTCTAA 618 0.4304 MDFGFGASTMYAAQHISAVQAACLHSDNYMALYDSDGDDDARSYFPCPFCCVEIEVPVLCSHLQKEHCFDLKNAVCPLCAANLGKDAIRHFIVQHSSSLKRRWKTDKSNIWSNNSAMLQKKLSANTRVNQHESTPDPLLSPFICNVAVPTPNSIHQDKHSNSNASVISAAKSNGREARVVGEPGDHEDRRQRAAFVQQLVASTIF 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1680 205 PANTHER PROTEIN DEHYDRATION-INDUCED 19 33 205 IPR033347 -
Lele24g1680 205 Pfam Drought induced 19 protein (Di19), zinc-binding 44 96 IPR008598 -
Lele24g1680 205 Pfam Stress-induced protein Di19, C-terminal 116 204 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1680 Lele-ChrLele24 22206032 22208804 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1680 24 22206032 22208804 Lele17g1091 17 21325063 21326034 CCT
Lele24g1680 24 22206032 22208804 Lele18g0447 18 2622690 2623755 CCT
Lele24g1680 24 22206032 22208804 Lele19g0468 19 2668711 2669682 CCT
Lele24g1680 24 22206032 22208804 Lele24g1680 24 22206032 22208804 ECH
Lele21g1741 21 25225441 25228662 Lele24g1680 24 22206032 22208804 hybridization
Lele22g1713 22 22556487 22559651 Lele24g1680 24 22206032 22208804 hybridization