Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0468 ATGGGTACTTCTAATGGACTAGCCATTTCACAAGGGAGAGAACCTGTCTTTTCATTTGGATTGATCTCGGATGTCCAGTATGCTGACATTCCTGATGGGTGCTCATTCCTTGGAGTTCCTCGGTATTATAGGCATAGCATTCTCATATTACAGAGAGCAGTGAAAGAGTGGAATGCTCATCAGCAGCATAAATTTGTGATAAATTTTGGGGACATTGTCGATGGATATTGTCCAAAAGATCAATCTTTTAATACCGTAAAGAAAGTTGTGAATGAATTCGACAAGTTCAAGGGACCCGTGTATCATATGATAGGCAATCACTGTCTATACAACCTTCCCCGCAGCAAGTTACTTCCGTTATTGAATATTCAGAGTCCTGACGGCCATGCTTACTATGAGTTTTCTCCTGTGCCAGGATATAGATTTGTAGTTCTGGATGCCTATGACGTTAGTGCCATTGGTTGGCCTCAGGATCATCCAAGAACATTGGAGGCCTGGAAATTCCTCCGAGAAAAGAATCCAAATGTAGATAAGAACAGTCCTGCAGGTTTAGTGGGGCTTGACAGGAGGTTTCTCAAGTTCAATGGAGCCATCGGAAAGGAACAGATGGAATGGCTGAATGGTGTTCTTCAGGAAGCAACTGAATTGAAACAGAAGGTGGTGGTCTGTTGTCATCTGCCTCTAGATCCAGGGGCCTCAACCAAAGAGGCACTGTTATGGAACTACGAGAAAGTAATGGAATTGATTCACCGATATAATTGCGTTAAGGTCTGTCTAGCTGGACATGATCACAGAGGTGGGTACTCTATTGATTCCCATGGAGTACATCATAGAATTCTTGAAGCCGCCTTAGAATGTCCTCCAGGCACGGATGCATTTGGACATATGAATGTTTATGATGACAGGATATCACTTGTTGGTACAGGCAGAATGGAGAGTGTAGACATGTATTTTAATTCCCAAGCAGATTAA 972 0.428 MGTSNGLAISQGREPVFSFGLISDVQYADIPDGCSFLGVPRYYRHSILILQRAVKEWNAHQQHKFVINFGDIVDGYCPKDQSFNTVKKVVNEFDKFKGPVYHMIGNHCLYNLPRSKLLPLLNIQSPDGHAYYEFSPVPGYRFVVLDAYDVSAIGWPQDHPRTLEAWKFLREKNPNVDKNSPAGLVGLDRRFLKFNGAIGKEQMEWLNGVLQEATELKQKVVVCCHLPLDPGASTKEALLWNYEKVMELIHRYNCVKVCLAGHDHRGGYSIDSHGVHHRILEAALECPPGTDAFGHMNVYDDRISLVGTGRMESVDMYFNSQAD 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0468 323 PANTHER - 11 319 - -
Lele19g0468 323 SUPERFAMILY Metallo-dependent phosphatases 15 318 IPR029052 -
Lele19g0468 323 Gene3D - 12 311 IPR029052 -
Lele19g0468 323 CDD MPP_Nbla03831 17 305 IPR041869 -
Lele19g0468 323 Pfam Calcineurin-like phosphoesterase 18 265 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0468 Lele-ChrLele19 2668711 2669682 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1741 21 25225441 25228662 Lele19g0468 19 2668711 2669682 CCT
Lele22g1713 22 22556487 22559651 Lele19g0468 19 2668711 2669682 CCT
Lele23g0269 23 1831702 1834892 Lele19g0468 19 2668711 2669682 CCT
Lele24g1680 24 22206032 22208804 Lele19g0468 19 2668711 2669682 CCT
Lele17g1091 17 21325063 21326034 Lele19g0468 19 2668711 2669682 hybridization
Lele18g0447 18 2622690 2623755 Lele19g0468 19 2668711 2669682 hybridization