Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1713 ATGGACTTCGGTTTCAGGGCCTCTACAATTTATGCTGCTCAGCATCTCTCTGCTGTCCAAGCTGCTTGCCTTCACTCTGATAATTATATGCCACTTTATCACTCGGATGGAGATGATGATGCCCGGTCATATTTTCCTTGTCCTTTCTGTTGTGTGGAAATTGAAGTTCCTGTTCTCTGTAGCCATCTGCAAAAGGAGCATTGCTTTGACCTAAAAAATGCTGTTTGTCCTCTGTGTGCAGCAAATTTAGGGAAGGATGTGATCAGACATTTTATAGTACAACATTCAAGCTCACTGAAGAGAAGGTGGAAAACTGAGAAATCCAGAATCTGGTATAATAATTCAGCTATGCTTCAAAAGAAACTGGCTGCAAATACCAGGGGAAACAAACATGAATCAACGCCTGATCCACTTTTGTCACCATTTATTTGCAATGTAGCTGTTCCAACCCCTAACAGCATTCATCAAGACAAACATTCCAACAACAATGCCTCAGTCATTTCTGCTGCAAAAAGTGATGGGAGAGAAGCAAGAGTTGTGGGTGACCGGGGAGATCACAAAGATAGAAGGCAGCGGGCAGCATTTGTGCAAGAGTTGGTAGCATCAACCATATTCTAA 618 0.4256 MDFGFRASTIYAAQHLSAVQAACLHSDNYMPLYHSDGDDDARSYFPCPFCCVEIEVPVLCSHLQKEHCFDLKNAVCPLCAANLGKDVIRHFIVQHSSSLKRRWKTEKSRIWYNNSAMLQKKLAANTRGNKHESTPDPLLSPFICNVAVPTPNSIHQDKHSNNNASVISAAKSDGREARVVGDRGDHKDRRQRAAFVQELVASTIF 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1713 205 PANTHER PROTEIN DEHYDRATION-INDUCED 19 34 205 IPR033347 -
Lele22g1713 205 Pfam Drought induced 19 protein (Di19), zinc-binding 44 96 IPR008598 -
Lele22g1713 205 Pfam Stress-induced protein Di19, C-terminal 116 204 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1713 Lele-ChrLele22 22556487 22559651 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1713 22 22556487 22559651 Lele17g1091 17 21325063 21326034 CCT
Lele22g1713 22 22556487 22559651 Lele18g0447 18 2622690 2623755 CCT
Lele22g1713 22 22556487 22559651 Lele19g0468 19 2668711 2669682 CCT
Lele22g1713 22 22556487 22559651 Lele22g1713 22 22556487 22559651 ECH
Lele22g1713 22 22556487 22559651 Lele23g0269 23 1831702 1834892 hybridization
Lele22g1713 22 22556487 22559651 Lele24g1680 24 22206032 22208804 hybridization