Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1313 ATGTGGTGGATGATGGGAGAAACCGAAGGGCATTACTGTTCTAAGAAGACTGATGATTTGTGCAGCGAAGTTTGTGGCCAGGGATCAAGTCCAGTATCAGGCATGTCAAGAGTTCGTTGCATCTTGCGTGGCTTGGATGTAAAAACCTACATATTTCTTTTTGCTGTCGTCCCTATGTGTATCTTTGGAATTTATATGCATGGACAGAAGATTTCATACTTTCTGCGGCCACTTTGGGAAAAACCACCCAAGCCTTTCAAGGTTATCCCGCATTACTACAATCAAAATGTGTCAATGGAGAATCTCTGCAGACTTCATGGCTGGGGAGTCCGTGAATACCCAAGACATGTTTATGATGCTGTATTGTTCAGTAATGAGTTGGAAATACTGAACTTACGGTGGAGAGAATTGTATCCTTACATATCAGAATTTGTCCTTCTTGAGTCAAATTCTACGTTCACTGGACTGCCTAAGCCTCTTGTTTTTAAAAGCAATCGGGAGCAGTTCAAATTTGTTGAGTCCCGGTTAACATATGGGACCGTTGGTGGGAGATTTAAGAGAGGAGAAAACCCATTTGTTGAGGAGGCCTATCAGCGAGTAGCACTAGACCAGCTTCTTAAGATAGCTGGTATTTCAGATGATGACTTGTTGATTATGTCTGATGTTGATGAGATACCAAGCGCTCACACTATTAACCTCTTGAGGTGGTGTGATGACATACCTTCAATCCTCCATCTTCAACTGAAGAATTATCTCTATTCCTTTGAGTTTCATGTGGATGATGACAGCTGGAGAGCTTCAGTTCACAGGTATCAAAGTGGAAAGACAAGGTATGCTCATTTTCGCCAATCCGATGACTTATTGGCAGATTCCGGCTGGCACTGTAGCTTCTGTTTCCGTCGAATCAGTGATTTCATTTTTAAGATGAAAGCCTACAGCCATTATGACAGAGTAAGGTTCTCTCATTATTTAAACCCCAAAAGAATTCAGAAAGTAATATGCAAAGGGGACGATTTATTCGACATGCTTCCAGAGGAGTACACCTTCAAGGAAATCATTGGTAAAATGGGACCAATACCCCATTCTTATTCTGCAGTTCATCTTCCTGCTTACCTTTTGGAGAATGTAGAGAAGTTCAAATTTCTCTTGCCTGGAAATTGTACAGATGCCATGATGCTGGGTGGGCTAGGGGAATCTGTACATAATTTAGAGTTGGACTTCACTGAAGAGGTAGCAGAGTGTCTGTCCTGGAGAGAGAGGGAAAGTTTGTCTGTGAGAATATGGCTATAG 1290 0.4202 MWWMMGETEGHYCSKKTDDLCSEVCGQGSSPVSGMSRVRCILRGLDVKTYIFLFAVVPMCIFGIYMHGQKISYFLRPLWEKPPKPFKVIPHYYNQNVSMENLCRLHGWGVREYPRHVYDAVLFSNELEILNLRWRELYPYISEFVLLESNSTFTGLPKPLVFKSNREQFKFVESRLTYGTVGGRFKRGENPFVEEAYQRVALDQLLKIAGISDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLKNYLYSFEFHVDDDSWRASVHRYQSGKTRYAHFRQSDDLLADSGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPKRIQKVICKGDDLFDMLPEEYTFKEIIGKMGPIPHSYSAVHLPAYLLENVEKFKFLLPGNCTDAMMLGGLGESVHNLELDFTEEVAECLSWRERESLSVRIWL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1313 429 Pfam Glycosyltransferase family 17 45 388 IPR006813 GO:0003830|GO:0006487|GO:0016020
Lele24g1313 429 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 35 388 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1313 Lele-ChrLele24 19127513 19129781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1313 1 387 Glycosyltransferase AT1G12990 78.036 0.0 665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1313 24 19127513 19129781 Lele24g1313 24 19127513 19129781 ECH
Lele21g1360 21 22046189 22050242 Lele24g1313 24 19127513 19129781 hybridization
Lele22g1354 22 19330459 19332475 Lele24g1313 24 19127513 19129781 hybridization