Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1360 ATGCCGAGTTACATATATTATAGACAAGATAGCGATCCGGGATTCGAGCGATTTCTGTTCCGAGATCGATCTGCGTTGCTTGCTTGGTTTCAGGTGGTGGTGATATTGGACTCAGTAGTCAATTGGGTAAACGGCAGAATGTGGTGGATGATGGGGGAAACCGGAGGGCATTACTGTTCTAAGAAGACTGATGATTTGTGCGGCGATGTTTGTGGTCAGGGATCAAGCCAAGTATCAGTCATGTCAAGAGTTCGTTGCATTTTGCGTGGCTTGGATGTAAAAACCTACATATTTCTTTTTGCTGTCGTCCCTATGTGTGTCTTTGGAATTTATATGCATGGACAGAAAATTTCATACTTTCTGCGGCCACTTTGGGAAAAACCACCCAAGCCTTTCAAGGTTATCCCACATTACTACAATCAAAATGTGTCGCTGGAGAATCTCTGCAGACTTCATGGCTGGGGAGTCCGTGACTACCCAAGACGTGTTTATGATGCTGTGTTGTTCAGTAATGAGTTGGAAATACTGAACTTACGGTGGAGAGAATTGTATCCTTACATATCAGAATTTGTCCTTCTTGAGTCAAATTCTACATTCACTGGACTGCCTAAGCCTCTTGTTTTTAAAAGCAATCGGGAGCAGTTCAAATTTGTTGAGTCGCGGTTAACATATGGGACCGTTGGTGGGAGATTTAAGAGAGGAGAAAACCCATTTATTGAGGAGGCCTATCAGCGAGTAGCACTCGACCAGCTTCTTAAGATAGCTGGTATTTCAGATGATGACTTGTTGATTATGTCTGATGTTGATGAGATACCAAGCGCTCACACTATTAACCTCTTGAGGTGGTGTGATGACATACCTTCAATCCTCCATCTTCAACTGAAGAATTATCTCTATTCCTTTGAGTTTCATGTGGATGATGACAGCTGGCGAGCTTCAGTTCACAGGTATCAAAGTGGAAAGACAAGGTATGCTCATTTTCGCCAATCTGATGACTTATTGGCAGATTCTGGCTGGCATTGTAGCTTCTGTTTCCGCCGAATCAGTGATTTCATTTTTAAGATGAAAGCCTACAGCCATTATGATAGAGTAAGGTTCTCTCATTATTTAAATCCCAAAAGAATTCAGAAAGTAATCTGCAAAGGGGATGATTTATTTGACATGCTTCCAGAGGAGTACACCTTCAAGGAAATGATTGGTAAATTGGGACCAATACCCCATTCCTATTCTGCAGTTCATCTTCCTGCTTACCTTTTGGAGAATGCAGAGTTGTTGGAATTTCTCTTGCCCGGAAATTGCGTAAGAGAGAGCGAATGA 1317 0.4229 MPSYIYYRQDSDPGFERFLFRDRSALLAWFQVVVILDSVVNWVNGRMWWMMGETGGHYCSKKTDDLCGDVCGQGSSQVSVMSRVRCILRGLDVKTYIFLFAVVPMCVFGIYMHGQKISYFLRPLWEKPPKPFKVIPHYYNQNVSLENLCRLHGWGVRDYPRRVYDAVLFSNELEILNLRWRELYPYISEFVLLESNSTFTGLPKPLVFKSNREQFKFVESRLTYGTVGGRFKRGENPFIEEAYQRVALDQLLKIAGISDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLKNYLYSFEFHVDDDSWRASVHRYQSGKTRYAHFRQSDDLLADSGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPKRIQKVICKGDDLFDMLPEEYTFKEMIGKLGPIPHSYSAVHLPAYLLENAELLEFLLPGNCVRESE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1360 438 Pfam Glycosyltransferase family 17 91 436 IPR006813 GO:0003830|GO:0006487|GO:0016020
Lele21g1360 438 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 80 437 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1360 Lele-ChrLele21 22046189 22050242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1360 47 438 Glycosyltransferase AT1G12990 78.571 0.0 677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1360 21 22046189 22050242 Lele21g1360 21 22046189 22050242 ECH
Lele21g1360 21 22046189 22050242 Lele23g0662 23 5113107 5115102 hybridization
Lele21g1360 21 22046189 22050242 Lele24g1313 24 19127513 19129781 hybridization