Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1354 ATGTGGTGGATGATGGGAGAAACCGGAGGGCATTACTGTTCTAAGAAGACTGATGATTTGTGCAGCGATGTTTGTGGCCAGGGATCAAGTCCAGTATCAGGCATGTCAAGAGTTCGTTGCATCTTGCGTGGCTTGGATGTAAAAACCTACATATTTCTTTTTGCTGTCGTCCCTATGTGTATCTTTGGAATTTATATGCATGGACAGAAGATTTCATACTTTCTGCGGCCACTTTGGGAAAAACCACCCAAACCTTTCAAGGTTATCCCGCATTACTACAATCAAAATGTGTCAATGGAGAATCTCTGCAGACTTCATGGCTGGGGAGTCCGTGAATACCCAAGACGTGTTTATGATGCTGTGTTGTTCAGTAATGAGTTGGAAATACTGAACTTACGGTGGAGAGAATTGTATCCTTACATATCAGAATTTGTCCTTCTTGAGTCAAATTCTACGTTCACTGGATTGCCTAAGCCTCTCGTTTTTAAAAGCAATCGGGAGCGGTTCAAATTTGTTGAGTCCCGGTTAACATATGGGACCGTTGGTGGGAGATTTAAGAGAGGAGAAAACCCATTTGTTGAGGAGGCCTATCAGCGAGTAGCACTAGACCAGCTTCTTAAGATAGCTGGTATTTCAGATGATGACTTGTTGATTATGTCTGATGTTGATGAGATACCAAGCGCTCACACTATTGACCTCTTGAGGTGGTGTGATGACATACCTTCAATCCTCCATCTTCAACTGAAGAATTATCTCTATTCCTTTGAGTTTCATGTGGATGATGACAGCTGGAGAGCTTCAGTTCACAAGTATCAAAGTGGAAAGACAAGGTATGCTCATTTTCGCCAATCCGATGACTTATTGGCAGATTCTGGCTGGCACTGTAGCTTCTGTTTCCGCCGAATCAGTGATTTCATTTTTAAGATGAAAGCCTACAGCCATTATGACAGAGTAAGGTTCTCTCATTATTTAAATCCCAAAAGAATTCAGAAAGTAATATGCAAAGGGGACGATTTATTCGACATGCTTCCAGAGGAGTACACCTTCAAGGAAATTATTAGTAAAATGGGACCAATACCCCATTCCTATTCTGCAGTTCATCTTCCTGCTTACCTTTTGGAAAATGTAGAGAAGTTCAAATTTCTCTTGCCTGGAAATTGTGTAAGAGATAGCGAATGA 1179 0.4148 MWWMMGETGGHYCSKKTDDLCSDVCGQGSSPVSGMSRVRCILRGLDVKTYIFLFAVVPMCIFGIYMHGQKISYFLRPLWEKPPKPFKVIPHYYNQNVSMENLCRLHGWGVREYPRRVYDAVLFSNELEILNLRWRELYPYISEFVLLESNSTFTGLPKPLVFKSNRERFKFVESRLTYGTVGGRFKRGENPFVEEAYQRVALDQLLKIAGISDDDLLIMSDVDEIPSAHTIDLLRWCDDIPSILHLQLKNYLYSFEFHVDDDSWRASVHKYQSGKTRYAHFRQSDDLLADSGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPKRIQKVICKGDDLFDMLPEEYTFKEIISKMGPIPHSYSAVHLPAYLLENVEKFKFLLPGNCVRDSE 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1354 392 Pfam Glycosyltransferase family 17 45 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
Lele22g1354 392 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 35 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1354 Lele-ChrLele22 19330459 19332475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1354 1 392 Glycosyltransferase AT1G12990 77.551 0.0 671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1354 22 19330459 19332475 Lele22g1354 22 19330459 19332475 ECH
Lele22g1354 22 19330459 19332475 Lele23g0662 23 5113107 5115102 hybridization
Lele22g1354 22 19330459 19332475 Lele24g1313 24 19127513 19129781 hybridization