Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1281 ATGGAGATAATGCAGTACCAGCTTTCCCGATTACCTTACCAGGATTCCCTCAAAGTGCTGGAGGCTGATATTCAGCATGCCAATGCTTTATATATGAGCTTCTTTCATGTGCTTATCTATAAGGTGCACAAAGAGGGAAGATCAAGCCTCTCTGCTCATGGAAGGAAGGCTACCATCAGGGACTTTTATGCCGTTATATTACCATCTCTCCAGCGGCTTCATGGGAGCTTGGAGAAGTTGGAAACTTCTAAGGAAGGTTATTCTAACATAGAAGGTCCGAGTTCTAAGAAGATGATCGAAGCAGATGGGAGACTAAGCAGTGTGGATCTTGAGAGAGAGGATGAATGTGGGATCTGCTTGGAACCTTGCACCAAGATGGTTTTGCCTAATTGCTGCCATGCCATGTGTATCAAATGCTACCGCAAGTGGAACAGAAGGTCAGAGTCTTGTCCTTTTTGTCGCGGTAGCTTGAGGAGAGTTAATTCAGAGGACTTATGGGTGCTAACCTGTAGCGGTGATGTTGAGATATTAAGATGGCTTGTGAATGACAGAAATATGCTTAAAGATGCATTCCTAGAGTTCAAAAAATTGAAGAATGCTTTATCTCTGTTAGACATGCCAGAATCTGTCTCATCATCAAATTTGGAATCTCAAATAACTTGGATTAGTGGCTTTTTCCAAAGGGCCAGGGATGATATGAATGTTTTTCGTGAAGAAATTTCTATGATTAAGGAATCAGCCGAAGACTGTATTGACCACTTAAGTATGTCACCTCTTACGGGATTACAGGAAAAATATTACCTTCAATCTGAATTGTCTAATTTGAGAGGGGGTCCTTCCTATGAAATGTTTGAAAGAATTAGAAGTCTCTTGTATATTAAAGATAGTGAAGTAACGCTCTATGAGAATATACTAGAAGAGGAGATTCTAATTAGATCTGAGATGAATAAGCTATCAAATGAGTTGAAAGTGGCATGTGAAGGAATTCTAGGATTGAAAGAAGAGAGGGCTCTCTACAAAAAGATTATGAACGATCTGAGTAGAAGTCAGCTGTGCCTAGGGATAAATTCTTCTTGGCATTTAAGAAGGGCAAAGGTGTCTGAAGAACCTGCGCAGATGGAGAAAGCCAGTGTTTCTGAAAGAATATTGGCTGAAGCCCAGGAAACTGTAAAATCCATGGAACAAGCATTATCTTCTTCAGAGAATAGTATTAATCAACTTGTTGGAGAAAAGAGGGAATTAGAACTCGACAAAATTAACGTTCAAGAGGAATTACAGAAAGTGAAAGAAGAAGCTGCCGAGGTTTGCATGAGTGAGATATCTCTTAAAGGTACACTATTACAGGCAGAAAAGGATTTTTATGTTCCCACCAAAGAAAAGGAGCAGGATCAAGTCGGTAGGGATGCTGCAGATACGGACCTAGAGAGAGTTAAAGAAGAAGCAACACCACAAATAAGTAAACTAGCAGAGGCCAGGAAAAATATAGAGGATATAGAATACGCGCTATCTGAGATTAAGAGTAAAGTTATAATGTCGAATGAAAAACGTAATAATGATCAAATTATCAAGACCAATATGGAACAGGAGTTAAAAAAATGGCAAGATGAAGCTGATAATCTGGCTGACAAATTGAAGGATTCAACTGAAACTATAAAATCTTTGAACAATGCATTACTGAAGGCACAAGATGATATTTCTATCCTTGAAGAAGCAAATAAAATTTCCAAAGAGGAGATATCATCACTCAAGTGA 1752 0.3898 MEIMQYQLSRLPYQDSLKVLEADIQHANALYMSFFHVLIYKVHKEGRSSLSAHGRKATIRDFYAVILPSLQRLHGSLEKLETSKEGYSNIEGPSSKKMIEADGRLSSVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKWNRRSESCPFCRGSLRRVNSEDLWVLTCSGDVEILRWLVNDRNMLKDAFLEFKKLKNALSLLDMPESVSSSNLESQITWISGFFQRARDDMNVFREEISMIKESAEDCIDHLSMSPLTGLQEKYYLQSELSNLRGGPSYEMFERIRSLLYIKDSEVTLYENILEEEILIRSEMNKLSNELKVACEGILGLKEERALYKKIMNDLSRSQLCLGINSSWHLRRAKVSEEPAQMEKASVSERILAEAQETVKSMEQALSSSENSINQLVGEKRELELDKINVQEELQKVKEEAAEVCMSEISLKGTLLQAEKDFYVPTKEKEQDQVGRDAADTDLERVKEEATPQISKLAEARKNIEDIEYALSEIKSKVIMSNEKRNNDQIIKTNMEQELKKWQDEADNLADKLKDSTETIKSLNNALLKAQDDISILEEANKISKEEISSLK 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1281 583 FunFam RING/U-box superfamily protein 97 163 - -
Lele24g1281 583 ProSitePatterns Zinc finger RING-type signature. 131 140 IPR017907 -
Lele24g1281 583 Pfam Ring finger domain 114 154 IPR001841 -
Lele24g1281 583 PANTHER RING FINGER PROTEIN 41, 151 34 428 - -
Lele24g1281 583 ProSiteProfiles Zinc finger RING-type profile. 116 154 IPR001841 -
Lele24g1281 583 Coils Coil 523 583 - -
Lele24g1281 583 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 164 IPR013083 -
Lele24g1281 583 Coils Coil 488 508 - -
Lele24g1281 583 Coils Coil 383 431 - -
Lele24g1281 583 SMART ring_2 116 153 IPR001841 -
Lele24g1281 583 SUPERFAMILY RING/U-box 107 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1281 Lele-ChrLele24 18792890 18799302 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1281 24 18792890 18799302 Lele24g1281 24 18792890 18799302 ECH
Lele21g1324 21 21642925 21645194 Lele24g1281 24 18792890 18799302 hybridization
Lele22g1322 22 18937895 18940053 Lele24g1281 24 18792890 18799302 hybridization