Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1324 ATGATGCCCTACCAACTTTCCCGATTACCTTACCAGGATTCCCTCAAAGTGCTGGAGGCTGATATTCAGCATGCCAATGCTTTGGCTGCGGCAATTCCCAGAGCCAAGGGTGGGACTCTTCTTCAAATGAAATTGGTTTACAATGACTGGGCTCCACTCTTTCTCTTCTTGCTACAGTGGATGGATTGTTCTTGCTCTTGCTTTCTTCACAGATATATGAGCTTCTTTCATGTGCTTATCTATAAGGTTCACAAAGAGGGAAGATCAAGCATATCTGCTCATGGAAGGAAGGCTACCATCAGGGACTTTTATGCCGTTATATTGCCATCTCTCCAGCGGCTTCATGGGAGCTTGGAGAAGTTGGAAAGTTCTAAGGAAGGTTATTCGAGCATAGAAGGTCAGCGTTCTAAGAAGAAGATGATCGAAGCAGATGGGAGACTAAGCAATGTGGATCTTGAGAGAGAGGATGAATGTGGAATCTGCTTGGAACCTTGCACCAAGATGGTTTTGCCTAATTGCTGCCATGCCATGTGTATCAAATGCTACCGCAAGTGGAACAGAAGGTCAGAGTCTTGTCCCTTTTGTCGCGGTAGCTTGAGGAGAGTAAATTCAGAGGACTTATGGGTGCTAACCTGTAACGATGATGTTGTTGATGCAGAAACAGTGTCGAAGGAGGATTTGTTGCGATTCTACCTCTACATCAATAGCTTACCTAAAGATTACCCAGATGCACTCTTCTTAATGTATTATGAGTACTTAATTTGA 765 0.4405 MMPYQLSRLPYQDSLKVLEADIQHANALAAAIPRAKGGTLLQMKLVYNDWAPLFLFLLQWMDCSCSCFLHRYMSFFHVLIYKVHKEGRSSISAHGRKATIRDFYAVILPSLQRLHGSLEKLESSKEGYSSIEGQRSKKKMIEADGRLSNVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKWNRRSESCPFCRGSLRRVNSEDLWVLTCNDDVVDAETVSKEDLLRFYLYINSLPKDYPDALFLMYYEYLI 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1324 254 Pfam Ring finger domain 156 196 IPR001841 -
Lele21g1324 254 SUPERFAMILY RING/U-box 149 200 - -
Lele21g1324 254 FunFam RING/U-box superfamily protein 138 205 - -
Lele21g1324 254 PANTHER RING FINGER PROTEIN 41, 151 10 252 - -
Lele21g1324 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 207 IPR013083 -
Lele21g1324 254 ProSitePatterns Zinc finger RING-type signature. 173 182 IPR017907 -
Lele21g1324 254 ProSiteProfiles Zinc finger RING-type profile. 158 196 IPR001841 -
Lele21g1324 254 SMART ring_2 158 195 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1324 Lele-ChrLele21 21642925 21645194 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1324 21 21642925 21645194 Lele21g1324 21 21642925 21645194 ECH
Lele21g1324 21 21642925 21645194 Lele23g0703 23 5486924 5489208 hybridization
Lele21g1324 21 21642925 21645194 Lele24g1281 24 18792890 18799302 hybridization