Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1322 ATGGAGATAATGCCGTACCAGCTTTCCCAATTACCTTACCAGGATTCCCTCAAAGTGCTGGAGGCTGATATTCAGCATGCCAATGCTTTGGCTGCTGCGATGCCCGGAGCCAAGGGTGGGACTCTTCTTCAAATGAAATTGGTTTACAATGACTGGGCTCCACTGTTTCTCTTCTTACTACAGTGGATTGATTGCTCTTGCACTTGCTTTCTTCACAGATATATGAGCTTCTTTCATGTGCTTATCTATAAGGTGCACAAAGAGGGAAGATCAAGCCTAGCTGCTCATGGAAGGAAGGCTACCATCAGGGACTTTTATGCCGTTATATTGCCATCTCTCCAGCGGCTTCATGGGAGCTTGGAGAAGTTGGAAACTTCTAAGGAAGGTTATTCTAACATAGAAGGTCCGAGTTCTAAGAAGAAGATGATCGAAGCAGATGGGAGACTAAGCAGTGTGGATCTTGAGAGAGAGGATGAATGTGGAATCTGCTTGGAACCTTGCACTAAGATGGTTTTGCCTAATTGCTGCCATGCCATGTGTATCAAATGCTACCGCAAGTGGAACAGAAGGTCAGAGTCTTGTCCTTTTTGTCGCGGCAGCTTGAGGAGAGTTAATTCAGAGGACTTATGGGTGCTAACCTGTAACGATGATGTTGTCGATGCTGAAACGGTGTCGAAGGAGGACTTGTTGCGATTCTACCTCTACATCAATAGCTTACCTAAAGATTACCCAGATGCACTCTTCTTAATGTATTATGAATACTTAATTTGA 771 0.4449 MEIMPYQLSQLPYQDSLKVLEADIQHANALAAAMPGAKGGTLLQMKLVYNDWAPLFLFLLQWIDCSCTCFLHRYMSFFHVLIYKVHKEGRSSLAAHGRKATIRDFYAVILPSLQRLHGSLEKLETSKEGYSNIEGPSSKKKMIEADGRLSSVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKWNRRSESCPFCRGSLRRVNSEDLWVLTCNDDVVDAETVSKEDLLRFYLYINSLPKDYPDALFLMYYEYLI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1322 256 SUPERFAMILY RING/U-box 151 202 - -
Lele22g1322 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 209 IPR013083 -
Lele22g1322 256 Pfam Ring finger domain 158 198 IPR001841 -
Lele22g1322 256 ProSitePatterns Zinc finger RING-type signature. 175 184 IPR017907 -
Lele22g1322 256 FunFam RING/U-box superfamily protein 141 207 - -
Lele22g1322 256 PANTHER RING FINGER PROTEIN 41, 151 12 254 - -
Lele22g1322 256 SMART ring_2 160 197 IPR001841 -
Lele22g1322 256 ProSiteProfiles Zinc finger RING-type profile. 160 198 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1322 Lele-ChrLele22 18937895 18940053 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1322 22 18937895 18940053 Lele22g1322 22 18937895 18940053 ECH
Lele22g1322 22 18937895 18940053 Lele23g0703 23 5486924 5489208 hybridization
Lele22g1322 22 18937895 18940053 Lele24g1281 24 18792890 18799302 hybridization