Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0106 ATGGCTGTATGTGGGTGTATATCTACTGCGCATATGAATTGGCAGAGTAATATAATGGGAACAAGTGATATAGGACCTACCCCTGGATTTGGTTATCGGAATACATCAAGCCAAAAGATTTCGTTAGCGTTTGGAGGAAGTGAGTCCTTGGGTCTTAGATTGAGACTTCCTTGCACACGCTCTTTTAAGAGCAGTCTGAGGAAGAATGGCTTTCCCTTGCAGGTAGTTTGCATTGACTATCCAAGGCCAGAGCTTGAAAATACAGTTAATTTCTTAGAAGCTGCTTACTTGTCTTCAACCTTTCGCACTTCATCACGTCCAACAAAACCATTAGAGGTTGTTATTGCCGGTGCAGGATTAGCCGGTTTGTCAACTGCGAAATATTTGGCAGATGCTGGTCATAAACCTATACTACTGGAGGCAAGAGATGTTCTAGGTGGAAAGGTTGCTGCCTGGAAAGATGAAGATGGAGACTGGTATGAGACTGGCCTACACATATTCTTTGGAGCATACCCCAATGTTCAGAACCTATTTGGAGAACTGGGTATTAATGAACGGTTACAGTGGAAGGAGCATTCTATGATTTTTGCTATGCCAAATAAGCCTGGACAGTTCAGTCGATTTGATTTTCCTGAAGTCCTCCCTGCTCCTTTGAATGGAATATGGGCAATATTGAGGAACAGTGAGATGCTGACTTGGCCAGAGAAAGTCAAGTTTGCCATTGGATTGCTGCCAGCTATTCTTGGCGGGCAGGATTATGTTGAGGCTCAAGATGGTTTATCTGTTCAGGAGTGGATGAGAAAGCAGGGTGTACCTGAACGAGTAACTGATGAGGTGTTCGTAGCAATGTCAAAAGCCCTAAACTTCATCAACCCTGATGAACTTTCAATGCAGTGTATCTTGATAGCTTTAAACCGATTTCTTCAGGAGAAGCATGGTTCAAAAATGGCCTTTTTGGATGGGAATCCCCCAGAAAGACTCTGTATGCCAATCGTTGATCATATTCGATCCTTGGGTGGTGAAGTTCATCTCAATTCTCGCATTCAAAAAATTGAGCTGAATGATGAAGGGACAGTAAAGAATTTGTTATTAAATAATGGGAAGGTGACTGAAGGAGATGCATATGTGATGGCAACACCAGTTGATACCCTGAAGCTTCTTCTGCCTAACGACTGGAAAGAAATTCCATATTTCAAGAAATTGGAGAAACTGGTTGGGGTTCCGGTCATAAATGTTCACATATGGTTTGATAGAAAACTGAAGAACACGTACGATCACCTACTCTTTAGCAGAAGTCCCCTTCTGAGTGTATATGCTGACATGTCAGTAACTTGTAAGGAATATTATAGCCCAAATCACTCTATGCTGGAGCTGGTTTTTGCACCCGCTGAAGAATGGATTTCACGCAGTGATGAGGATATTATTGAGGCCACAATGAAGGAACTTTCCAAACTTTTTCCGGATGAAATTTCTGCAGGCCAAAGCAAAGCAAAGATAGTCAAGTACCATGTTGTTAAAACACCAAGGTCTGTTTACAAAACTGTTCCAAATTGTGAGCCTTGCCGTCCTGTACAAAGATCTCCCATAGAGGGTTTCTATTTAGCTGGTGATTACACAAAACAAAAGTATTTAGCTTCAATGGAAGGTGCTGTTCTTTCCGGAAAGCTCTGTGCTCAGGCTATTGTACAGGATTCTGAGCTGCTTGTTGCACGGGGGAAGACAAGGAGGGTTCAAGCAAGTGTTTGA 1746 0.425 MAVCGCISTAHMNWQSNIMGTSDIGPTPGFGYRNTSSQKISLAFGGSESLGLRLRLPCTRSFKSSLRKNGFPLQVVCIDYPRPELENTVNFLEAAYLSSTFRTSSRPTKPLEVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINERLQWKEHSMIFAMPNKPGQFSRFDFPEVLPAPLNGIWAILRNSEMLTWPEKVKFAIGLLPAILGGQDYVEAQDGLSVQEWMRKQGVPERVTDEVFVAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIRSLGGEVHLNSRIQKIELNDEGTVKNLLLNNGKVTEGDAYVMATPVDTLKLLLPNDWKEIPYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYSPNHSMLELVFAPAEEWISRSDEDIIEATMKELSKLFPDEISAGQSKAKIVKYHVVKTPRSVYKTVPNCEPCRPVQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLVARGKTRRVQASV 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0106 581 SUPERFAMILY FAD/NAD(P)-binding domain 109 563 IPR036188 -
Lele24g0106 581 FunFam 15-cis-phytoene desaturase, chloroplastic/chromoplastic 108 570 - -
Lele24g0106 581 TIGRFAM phytoene_desat: phytoene desaturase 113 562 IPR014102 GO:0016117|GO:0016166
Lele24g0106 581 Gene3D - 108 571 IPR036188 -
Lele24g0106 581 PRINTS Flavin-containing amine oxidase signature 112 131 IPR001613 GO:0016491
Lele24g0106 581 PRINTS Flavin-containing amine oxidase signature 543 560 IPR001613 GO:0016491
Lele24g0106 581 Pfam Flavin containing amine oxidoreductase 120 561 IPR002937 GO:0016491
Lele24g0106 581 PANTHER PROTOPORPHYRINOGEN OXIDASE 101 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0106 Lele-ChrLele24 680052 684807 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0111 21 720736 725514 Lele24g0106 24 680052 684807 hybridization
Lele22g0117 22 675265 680006 Lele24g0106 24 680052 684807 hybridization