Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0117 ATGGCTGTATGTGGGTGTATATCTACGGCTCATATGAATTGGCAGAGTAATATAATGGGAACAAGTGATATAGGACCTACCCCAGGATTTGGTTATCGGAATACATCAAGCCAAAAGATTTCGTTAGCGTTTGGAGGAAGCGAGTCCATGGGTCTTAGATTGAGACTTCCTTACACACGCTCTTTTAAGAGCAGTCTGAGGAAGAATGGCTTTCCCTTGCAGGTAGTTTGCATTGACTATCCAAGGCCAGAGCTTGAAAATACAGTTAATTTCTTAGAAGCTGCTTACTTGTCTTCAACCTTTCGCACTTCATCACGTCCAACAAAACCATTAGAGGTTGTTATTGCCGGTGCAGGATTAGCCGGTTTGTCAACTGCGAAATATTTGGCAGATGCTGGTCATAAACCTATACTACTGGAGGCAAGAGATGTTCTAGGTGGAAAGGTTGCTGCCTGGAAAGATGAAGATGGAGACTGGTATGAGACTGGCTTACACATATTCTTTGGAGCATACCCCAATGTTCAGAACCTATTTGGAGAACTGGGTATCAATGATCGGTTACAGTGGAAGGAACATTCTATGATTTTTGCTATGCCAAATAAGCCTGGACAGTTCAGTCGATTTGATTTTCCTGAAGTCCTCCCTGCTCCTTTGAATGGAATATGGGCAATATGGAGGAACAGTGAGATGCTGACTTGGCCAGAGAAAGTCAAGTTTGCCATTGGATTGCTGCCAGCTATTCTTGGCGGGCAGGATTATATTGAGGCTCAAGATGGTTTATCTGTTCAGGAGTGGATGAGAAAGCAGGGTGTACCTGAACGAGTAACTGATGAGGTGTTCATAGCAATGTCAAAAGCCCTAAACTTCATCAACCCTGATGAACTTTCAATGCAGTGTATCTTGATAGCTTTAAACCGATTTCTTCAGGAGAAGCATGGTTCAAAAATGGCCTTTTTGGATGGGAATCCCCCAGAAAGACTCTGCATGCCAATCGTTGATCATATTCGATCCTTGGGTGGTGAAGTTCATCTCAATTCTCGCATTCAAAAAATTGAGCTGAATGATGAAGGGACAGTAAAGAATTTGTTATTAAATAATGGGAAGGTGACTGAAGGAGATGTTTATGTGATGGCAACCCCAGTTGATACCCTGAAGCTTCTTCTGCCTAACGACTGGAAAGAAATTCCATATTTCAAGAAATTGGAGAAACTGGTTGGGGTTCCGGTCATAAATGTTCACATATGGTTTGATAGAAAACTGAAGAACACGTACGATCACCTACTCTTTAGCAGAAGTCCCCTTCTGAGTGTATATGCTGACATGTCGGTAACTTGTAAGGAATATTATAGCCCAAATCAATCTATGCTGGAGCTGGTTTTTGCACCAGCTGAAGAATGGATTTCACGCAGTGATAAGGATATTATTGAGGCCACAATTAAGGAACTTTCCAAACTCTTTCCGGATGAAATTTCTGCAGGCCAAAGCAAAGCAAAGATAGTCAAGTACCATGTTGTTAAAACACCAAGGTCTGTTTACAAAACTGTTCCAAATTGTGAGCCTTGCCGTCCTGTACAAAGATCTCCCATAGAGGGTTTCTATTTAGCTGGTGATTACACGAAACAAAAGTATTTAGCTTCAATGGAAGGTGCTGTTCTTTCCGGAAAGCTCTGTGCTCAGGCTATTGTACAGGATTCTCAGCTGCTTGTGGCACGGGGGCAGACAAGGAGGGTTCAAGCAAGTGTTTGA 1746 0.425 MAVCGCISTAHMNWQSNIMGTSDIGPTPGFGYRNTSSQKISLAFGGSESMGLRLRLPYTRSFKSSLRKNGFPLQVVCIDYPRPELENTVNFLEAAYLSSTFRTSSRPTKPLEVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGQFSRFDFPEVLPAPLNGIWAIWRNSEMLTWPEKVKFAIGLLPAILGGQDYIEAQDGLSVQEWMRKQGVPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIRSLGGEVHLNSRIQKIELNDEGTVKNLLLNNGKVTEGDVYVMATPVDTLKLLLPNDWKEIPYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDKDIIEATIKELSKLFPDEISAGQSKAKIVKYHVVKTPRSVYKTVPNCEPCRPVQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSQLLVARGQTRRVQASV 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0117 581 Gene3D - 108 571 IPR036188 -
Lele22g0117 581 PANTHER PROTOPORPHYRINOGEN OXIDASE 101 566 - -
Lele22g0117 581 SUPERFAMILY FAD/NAD(P)-binding domain 109 563 IPR036188 -
Lele22g0117 581 Pfam Flavin containing amine oxidoreductase 120 561 IPR002937 GO:0016491
Lele22g0117 581 PRINTS Flavin-containing amine oxidase signature 112 131 IPR001613 GO:0016491
Lele22g0117 581 PRINTS Flavin-containing amine oxidase signature 543 560 IPR001613 GO:0016491
Lele22g0117 581 FunFam 15-cis-phytoene desaturase, chloroplastic/chromoplastic 108 570 - -
Lele22g0117 581 TIGRFAM phytoene_desat: phytoene desaturase 113 562 IPR014102 GO:0016117|GO:0016166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0117 Lele-ChrLele22 675265 680006 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0117 22 675265 680006 Lele23g1938 23 22434205 22438892 hybridization
Lele22g0117 22 675265 680006 Lele24g0106 24 680052 684807 hybridization