Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0111 ATGGCTGTATGTGGGTGTATATCAACGGCGCACATGAATTGGCAGAGTAATATAATGGGAACAAGTGATATAGGACCTGCCCCAGGATTTGGTTATCGGAATACATCAAGCCAAAAGATTTCATTAGCGTTTGGAGGAAGCAAGTCCATGGGTCTTAAATTGAGACTTCCTTGCACACGCTCTTTTAAAAGCAGTCTGAGGAAGAATGGCTTTCCCTTGCAGGTAGTTTGCATTGACTATCCAAGGCCAGAGCTTGAAAACACAGTTAATTTCTTAGAAGCTGCTTACTTGTCTTCAACCTTTCGCGCTTCATCACGTCCAACAAAACCATTAGAGGTTGTTATTGCGGGTGCAGGGTTAGCTGGTTTGTCAACTGCGAAATATTTGGCAGATGCTGGTCATAAGCCTATACTACTGGAGGCAAGAGATGTTCTAGGTGGAAAGGTTGCTGCCTGGAAAGATGAAGATGGAGACTGGTATGAGACTGGCTTACACATATTCTTTGGAGCATACCCCAATGTTCAGAACCTATTTGGAGAACTGGGTATTAATGATCGGTTACAGTGGAAGGAGCATTCTATGATTTTTGCTATGCCAAACAAGCCTGGACAGTTCAGTCGATTTGATTTTCCTGAAGTCCTCCCTGCTCCTTTGAATGGAATATGGGCAATATTGAGGAACAGTGAGATGCTGTCTTGGCCAGAGAAAGTCAAGTTTGCTATTGGATTGCTGCCAGCTATTCTTGGCGGGCAGGATTATGTTGAGGCCCAAGATGGTTTATCTGTTCAAGAGTGGATGAGAAAGCAGGGTGTACCTGAGCGAGTAACTGATGAGGTGTTCATAGCGATGTCAAAGGCCCTAAACTTCATCAACCCTGATGAACTTTCAATGCAGTGTATCTTGATAGCTTTAAACCGATTTCTTCAGGAGAAGCATGGTTCAAAAATGGCCTTTTTGGACGGGAATCCACCAGAAAGATTCTGTATGCCAATCGTGGATCATATTCTATCCTTGGGTGGTGAAGTTCATCTCAATTCTCGCATTCAAAAAATTGAGCTGAATGATGAAGGGACAGTAAAGAATTTGTTATTAAATAATGGGAAGGTGATTGAAGGAGATGCTTATGTGCTTGCAACTCCAGTTGATATCCTGAAGCTTCTTCTGCCTAACGACTGGAAAGAAATTCTATATTTCAAGAAATTGGAGAAACTAGTTGGAGTTCCGGTCATAAATATTCACATATGGTTTGATAGAAAACTGAAGAACACATATGATCACCTACTATTTAGCAGAAGTCCCCTTCTGAGTGTATATGCTGACATGTCAGTAACTTGTAAGGAATATTATAGCCCAAACCAGTCAATGCTGGAGTTGGTTTTTGCCCCAGCTGAAGAATGGATTTCACGCAGTGATGAAGATATTATTGAGGCCACAATGAAGGAACTTTCCAAACTCTTTCCGGATGAAATTTCCGCAGACCAAAGCAAAGCAAAGATAGTCAAGTACCATGTTGTTAAAACACCAAGGTCTGTTTACAAAACTGTTCCAAATTGTGAGCCTTGCCGTCCTGTACAAAGATCTCCCATAGAGGGTTTCTATTTAGCTGGTGATTACACAAAACAAAAGTATTTAGCTTCAATGGAAGGTGCTGTTCTTTCCGGAAAGCTCTGTGCGCAGGCTATTGTACAGGATTCTGAGATGCTTGTTGGACGGGGGCAGAGAAGGAGGGTTCAAGCAAGTGTTTGA 1746 0.4221 MAVCGCISTAHMNWQSNIMGTSDIGPAPGFGYRNTSSQKISLAFGGSKSMGLKLRLPCTRSFKSSLRKNGFPLQVVCIDYPRPELENTVNFLEAAYLSSTFRASSRPTKPLEVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGQFSRFDFPEVLPAPLNGIWAILRNSEMLSWPEKVKFAIGLLPAILGGQDYVEAQDGLSVQEWMRKQGVPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERFCMPIVDHILSLGGEVHLNSRIQKIELNDEGTVKNLLLNNGKVIEGDAYVLATPVDILKLLLPNDWKEILYFKKLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDEDIIEATMKELSKLFPDEISADQSKAKIVKYHVVKTPRSVYKTVPNCEPCRPVQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSEMLVGRGQRRRVQASV 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0111 581 TIGRFAM phytoene_desat: phytoene desaturase 113 562 IPR014102 GO:0016117|GO:0016166
Lele21g0111 581 PANTHER PROTOPORPHYRINOGEN OXIDASE 101 566 - -
Lele21g0111 581 Pfam Flavin containing amine oxidoreductase 120 561 IPR002937 GO:0016491
Lele21g0111 581 PRINTS Flavin-containing amine oxidase signature 112 131 IPR001613 GO:0016491
Lele21g0111 581 PRINTS Flavin-containing amine oxidase signature 543 560 IPR001613 GO:0016491
Lele21g0111 581 SUPERFAMILY FAD/NAD(P)-binding domain 109 563 IPR036188 -
Lele21g0111 581 FunFam 15-cis-phytoene desaturase, chloroplastic/chromoplastic 108 570 - -
Lele21g0111 581 Gene3D - 108 569 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0111 Lele-ChrLele21 720736 725514 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0111 21 720736 725514 Lele23g1938 23 22434205 22438892 hybridization
Lele21g0111 21 720736 725514 Lele24g0106 24 680052 684807 hybridization