Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0101 ATGGAAGTTGATCCCAATTGGGCTTCAGTGTTGACGTTACAAATTAAAAGGCTTCTAGACCGGCGATTCTGCAATTCGGCCGAGAAGCTCATAGACTTGAAACTTGTATTCAAGAGCTCCCTCTCTCCCTCGCTTTCCGCTTCATCGCAGAAACAGACAACAATGTCGGAATTGGCGAGCGCAGACCCCGAAGGTATTGACGGAGTTCGCATGACATGGAACGCGTGGCCCCGCACCAAGGTCGAAGCCAGCAAGTGCGTTATCCCACTGGCTGCCAACATCTCCTTGATCCGTTCTCATCCAGACATTCCACGCCTCCCTTATGCCCCTCTTCGCTGCAAGACCTGCTCGTCCGTTCTCAATCCATTCTCTCGCGTTGATTTCACTGCTAAGATCTGGATCTGCCCTTTTTGCTATCAACGCAATCATTTTCCCCCTCATTATAATGCGATATCTGAGACCAATGTCCCCGGGGAGCTCTACCCCCAGTACACCACTGTTGAATATGTGCTCCCTCCCTCTTCCAACCCCAATTCATTCGGGAACCCCAATCTCGATCCGGTCCATCAGTTGCAGCCTTCCCCTGTTTTTGTCTTCTTGCTTGACACTTGCATGATCGAGGAGGAGATGGAGTTTGTGAAATCCGCACTTAGACAGGCGATCGGTCTGCTACCTGACAATGCTCTCGTGGGTTTCATTTCTTTTGGTACCCAGGTTCAAGTTCATGAATTGGGGTTCTCTGACATGTCCAAGGTTTATTTGTTCCGGGGTAGTAAGGAGATTGCGAAAGAACATATTCTGGAGCAACTGGGTCTGGGTGCCTCTGGGAGGCGACAGGCCGGCGCATATCAAATGGGGTTGAAGGGTGGATTCCCCCCGTCAGGTGTAACGCGGTTTTTACTGCCTGCATCTGATTGTGAATACACTCTCAATTCGGTGGGTTTGAAAGCAAATTTGCGTCTACTGGATGAATTGCAAACCGATCAATGGCCTGTTCCACCAGGCAGTCGTCCAGCTCGGTGCACTGGAGTGGCCATAAGTGTCGCGGCAGGATTGCTTGGTGCTTGTGTTCCTGGGACTGGGGCTAGAATCATAGCTTTGGTCGGGGGACCATGCACCGAAGGACCAGGCTCTATTGTGTCCAAAGATCTATCTGACCCAGTGCGTTCTCACAAAGATCTTGATAAAGACGCAGCGCCCTACTTCAAAAAAGCTGTCAAATTCTACGAGGGTCTTGCAAAACAGGTGGTTAGCCAGGGTCATGTTTTAGATATTTTTGCATCAGCCCTTGATCAGGTTGGAGTTGCAGAAATGAAAGTTGCAGTTGAAAGGACAGGTGGCCTTGTTGTTCTTGCTGAAAGTTTTGGTCATTCAGTTTTCAAGGACTCATTTAAGCGTGTTTTTGAGGATGGGGAGCAGTCACTTGGCCTTTGTTTTAATGGAACCCTTGAGATCAACTGCTCGAAGGAAATAAAAATTCAAGGAATTATTGGACCTTGCACATCATTGGAGAAGAAAGGGCCTTCGGTTGCTGATACTGTGATAGGAGAGGGGAATACTACAGCGTGGAAGATGTGTGGCCTTGACAAGAGTACTTGCTTGACAGTGATGTTTGATCTTTCAACAAGTGATCGTTCAAACAATCCAGGAACCATCAACCCACAGTTTTACCTACAGTTCCTTACAAGTTACCAGGGTCCTGATGGTCAATTAGCCCTTCGTGTAACAACAGTGACTAGAAGATGGGTAGATAGTGCTGTTAACTCCGAGGAATTGGTACAAGGATTTGATCAAGAAACAGCTGCAGTTGTAATGGCTAGATACACTTCTCTGAAAATGGAGATGGAGGAAGCATTTGATGTCACACGGTGGTTAGATCGGCACCTCATTCGTCTGTGTTCAAAATTTGGGGACTACCGCAAGGATGACCCATCATCATTTACATTAAACCCTTCATTTTCGTTGTTCCCTCAGTTTATGTTTAATCTGCGACGATCACAGTTTGTACAGGTTTTTAACAATAGTCCAGATGAGACTGCCTACTTCCGCATGCTGTTGAACAGGGAAAACATTAGTAATGCGGCTGTCATGATTCAGCCATCTTTAATATCATATTCATTCAATTCACTGCCTGCACCTGCGTTGTTGGATGTATCTTCCATTGCTGCTGACAGGATTCTGCTGCTAGATTCATATTTTAGTGTCGTCATTTTTCATGGGATGACCATAGCTCAGTGGCGCAACTTAGGATACCAGAATGAACCAGAACACCAGGCATTTGCACAACTGTTACAAGCCCCACGTGATGATGCTCAAATCATCATCAGAGATCGTTTTCCTGTTCCTAGATTGGTAGTTTGTGATCAACATGGTTCGCAGGCTAGATTTTTATTAGCAAAGCTGAACCCCTCGGCAACATACAACAATGCACAAGAGATGGCTGCTGGTTCAGATGTGATCTTCACTGATGATGTGAGCCTTCAAGTCTTCTTTGAGCATCTTCAAAAGCTTGCTGTCCAATCTTGA 2526 0.4667 MEVDPNWASVLTLQIKRLLDRRFCNSAEKLIDLKLVFKSSLSPSLSASSQKQTTMSELASADPEGIDGVRMTWNAWPRTKVEASKCVIPLAANISLIRSHPDIPRLPYAPLRCKTCSSVLNPFSRVDFTAKIWICPFCYQRNHFPPHYNAISETNVPGELYPQYTTVEYVLPPSSNPNSFGNPNLDPVHQLQPSPVFVFLLDTCMIEEEMEFVKSALRQAIGLLPDNALVGFISFGTQVQVHELGFSDMSKVYLFRGSKEIAKEHILEQLGLGASGRRQAGAYQMGLKGGFPPSGVTRFLLPASDCEYTLNSVGLKANLRLLDELQTDQWPVPPGSRPARCTGVAISVAAGLLGACVPGTGARIIALVGGPCTEGPGSIVSKDLSDPVRSHKDLDKDAAPYFKKAVKFYEGLAKQVVSQGHVLDIFASALDQVGVAEMKVAVERTGGLVVLAESFGHSVFKDSFKRVFEDGEQSLGLCFNGTLEINCSKEIKIQGIIGPCTSLEKKGPSVADTVIGEGNTTAWKMCGLDKSTCLTVMFDLSTSDRSNNPGTINPQFYLQFLTSYQGPDGQLALRVTTVTRRWVDSAVNSEELVQGFDQETAAVVMARYTSLKMEMEEAFDVTRWLDRHLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAAVMIQPSLISYSFNSLPAPALLDVSSIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNEPEHQAFAQLLQAPRDDAQIIIRDRFPVPRLVVCDQHGSQARFLLAKLNPSATYNNAQEMAAGSDVIFTDDVSLQVFFEHLQKLAVQS 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0101 841 FunFam Protein transport protein SEC23 594 717 - -
Lele24g0101 841 FunFam Protein transport protein SEC23 699 803 - -
Lele24g0101 841 SUPERFAMILY vWA-like 195 469 IPR036465 -
Lele24g0101 841 Pfam Sec23/Sec24 trunk domain 194 468 IPR006896 GO:0006886|GO:0006888|GO:0030127
Lele24g0101 841 FunFam Protein transport protein SEC23 194 478 - -
Lele24g0101 841 CDD Sec23_C 689 809 IPR037550 GO:0030127|GO:0090114
Lele24g0101 841 Pfam Sec23/Sec24 helical domain 597 693 IPR006900 GO:0006886|GO:0006888|GO:0030127
Lele24g0101 841 Gene3D - 64 580 - -
Lele24g0101 841 Gene3D - 107 166 - -
Lele24g0101 841 SUPERFAMILY Zn-finger domain of Sec23/24 101 173 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Lele24g0101 841 Gene3D Severin 699 803 IPR029006 -
Lele24g0101 841 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 700 840 IPR036180 -
Lele24g0101 841 Pfam Sec23/Sec24 beta-sandwich domain 479 583 IPR012990 -
Lele24g0101 841 Pfam Gelsolin repeat 709 797 IPR007123 -
Lele24g0101 841 SUPERFAMILY Helical domain of Sec23/24 597 699 IPR036175 GO:0006886|GO:0006888|GO:0030127
Lele24g0101 841 Gene3D Sec23/Sec24 helical domain 594 838 - -
Lele24g0101 841 Gene3D von Willebrand factor, type A domain 194 477 IPR036465 -
Lele24g0101 841 Pfam Sec23/Sec24 zinc finger 110 148 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Lele24g0101 841 SUPERFAMILY beta-sandwich domain of Sec23/24 62 596 - -
Lele24g0101 841 FunFam Protein transport protein SEC23 107 166 - -
Lele24g0101 841 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 61 840 IPR037364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0101 Lele-ChrLele24 654674 661284 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0108 21 687270 692948 Lele24g0101 24 654674 661284 hybridization
Lele22g0113 22 644838 651557 Lele24g0101 24 654674 661284 hybridization