Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0108 ATGACATGGAACGCGTGGCCCCGCACCAAGGTCGAAGCTAGCAAGTGCGTCATCCCACTTGCTGCCAACATCTCCTTGATCCGTTCTCATCCCGACATTCCACGCCTCCCGTATGCCCCTCTCCGCTGCAAGACCTGCTCGTCCGTTCTCAATCCCTTCTCTCGCGTTGATTTCACTGCTAAGATCTGGATCTGCCCTTTTTGCTATCAACGCAATCATTTTCCCCCTCATTATAATGCGATCTCTGAGACCAATGTCCCCGGGGAGCTCTACCCCCAGTACACCACTGTTGAATATGTGCTTCCCCTCTCCTCCAACCCCAATTCATTCGGGAACCCCAATCTCGATCCGGCCGATCAGTTGCAGCCTTCCCCTGTTTTTGTCTTTTTGCTTGACACATGCATGATCGAGGAGGAGATGGAGTTTGTGAAATCCGCACTTAGACGGGCGATCGGTCTGCTACCTGACAATGCTCTCGTCGGTTTCATATCTTTTGGTACCCAGGTTCAAGTTCATGAATTGGGGTTCTCGGACATGTCCAAGGTTTATGTGTTCCGGGGTAATAAGGAGATTGCGGAAGAACAGATTTTGGAGCAACTGGGTCTGGGTGCCTGTGGGAGGAGACAGGCCGGCGCATATCAAAAGGGATTGAAGGGTGGATTCCCCCCTTCAGGGGTAACACGGTTTTTACTGCCTGCATCTGATTGTGAATACACTCTTAATTCGCTACTGGATGAATTGCAAACCGATCAATGGCCTGTTCCACCAGGTAGTCGTCCAGCTCGGTGCACTGGAGTGGCTTTAAGTGTCGCAGCAGGATTGCTCGGTGCTTGTGTTCCTGGTACTGGGGCTAGAATCATAGCTTTGGTCGGGGGTCCGTGCACCGAAGGACCAGGATCGATTGTGTCCAAAGATCTATCTGACCCAGTGCGTTCTCATAAAGATCTTGATAAAGACGCTGCACCCTACTTCAAAAAAGCTGTCAAATTCTACGAGGGTCTTGCAAAACAGCTGGTTAGCCAGGGTCATGTTTTAGATCTTTTTGCATCAGCCCTTGATCAGGTTGGGGTTGCAGAAATGAAAGTTGCGGTTGAAAGGACAGGTGGCCTTGTTGTTCTTGCTGAAAGTTTTGGTCATTCTGTTTTCAAGGACTCATTTAAGCATGTTTTTGAGGACGGGGAGCAGTCACTTGGTCTTTGTTTCAATGGAACCCTTGAGATCAACTGCTCCAAGGAAATAAAAATTCAAGGAATTATTGGACCTTGCACATCATTGGAAAGGAAAGGGCCTTCGGTTGCTGATACTGTGACAGGAGAGGGGAATACAACAGCATGGAAGATGTGCGGCCTTGACAAGAGTACTTGCTTGACAGTAATGTTTGATCTTTCACCAAGTGATCGTTCAAACAGTCCAGGAACCATCAACCCACAGTTTTACCTACAGTTCCTTACAAGTTTCCAGGGTCCTGATGGTCAACTAGCTCTTCGAGTAACAACAATAACTAGAAGATGGGTAGATAGTGCTGTTAACTCTGAGGAATTGGTACAAGGATTTGATCAAGAAACAGCTGCAGTTGTAATGGCTAGATACACTTCTCTGAAAATGGAGATGGAGGAAGCATTTGATGCTACACGGTGGTTAGATCGACACCTCATCCGTCTCTGTTCAAAATTTGGGGACTACCGCAAGGATGACCCATCATCATTTACATTAAACCCATCATTTTCATTGCTCCCTCAGTTTATGTTCAATCTGCGACGATCACAGTTTGTACAGGTTTTTAACAATAGTCCAGATGAGACTGCCTACTTCCGCATGCTGTTAAACAGGGAAAAAATTAGTAATGCTGCCGTCATGATTCAGCCATCTTTAATATCATATTCATTTAATTCACTGCCTTCACCTGCATTGTTGGATGTATCTTCCATCGCTGCTGACAGGATTCTGTTGCTAGATTCATATTTTAGTGTCGTCAATTTTCATGGGATGACCATAGCCCAGTGGCGCAACTTAGGATACCAGAACCAACCAGAACATCAGGCATTTGCACAGCTATTACAAGCTCCACGTGATGATGCCCAAATCATCATCAGAGATCGTTTTCCTGTTCCTAGATTGGTAGTTTGTGATCAACATGGTTCCCAGCTTTACTGGGGGTTTGTTGATGTGGAACAGGCTAGATTTTTATTAGCAAAGCTGAACCCCTCGGCAACATACAACAATGCACACGAGATGGCTGCTGGTTCAGATGTGATCTTCACGGATGATGTGAGCCTTCAAGTCTTCTTTGAGCATCTTCAAAAGCTGGCTGTCCAATCTTGA 2322 0.4655 MTWNAWPRTKVEASKCVIPLAANISLIRSHPDIPRLPYAPLRCKTCSSVLNPFSRVDFTAKIWICPFCYQRNHFPPHYNAISETNVPGELYPQYTTVEYVLPLSSNPNSFGNPNLDPADQLQPSPVFVFLLDTCMIEEEMEFVKSALRRAIGLLPDNALVGFISFGTQVQVHELGFSDMSKVYVFRGNKEIAEEQILEQLGLGACGRRQAGAYQKGLKGGFPPSGVTRFLLPASDCEYTLNSLLDELQTDQWPVPPGSRPARCTGVALSVAAGLLGACVPGTGARIIALVGGPCTEGPGSIVSKDLSDPVRSHKDLDKDAAPYFKKAVKFYEGLAKQLVSQGHVLDLFASALDQVGVAEMKVAVERTGGLVVLAESFGHSVFKDSFKHVFEDGEQSLGLCFNGTLEINCSKEIKIQGIIGPCTSLERKGPSVADTVTGEGNTTAWKMCGLDKSTCLTVMFDLSPSDRSNSPGTINPQFYLQFLTSFQGPDGQLALRVTTITRRWVDSAVNSEELVQGFDQETAAVVMARYTSLKMEMEEAFDATRWLDRHLIRLCSKFGDYRKDDPSSFTLNPSFSLLPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNREKISNAAVMIQPSLISYSFNSLPSPALLDVSSIAADRILLLDSYFSVVNFHGMTIAQWRNLGYQNQPEHQAFAQLLQAPRDDAQIIIRDRFPVPRLVVCDQHGSQLYWGFVDVEQARFLLAKLNPSATYNNAHEMAAGSDVIFTDDVSLQVFFEHLQKLAVQS 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0108 773 Gene3D von Willebrand factor, type A domain 124 399 IPR036465 -
Lele21g0108 773 Gene3D - 37 96 - -
Lele21g0108 773 Gene3D Severin 621 735 IPR029006 -
Lele21g0108 773 FunFam Protein transport protein SEC23 124 400 - -
Lele21g0108 773 Pfam Sec23/Sec24 zinc finger 40 78 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Lele21g0108 773 Pfam Sec23/Sec24 helical domain 519 615 IPR006900 GO:0006886|GO:0006888|GO:0030127
Lele21g0108 773 Gene3D - 1 502 - -
Lele21g0108 773 FunFam Protein transport protein SEC23 516 640 - -
Lele21g0108 773 FunFam Protein transport protein SEC23 621 735 - -
Lele21g0108 773 Pfam Sec23/Sec24 beta-sandwich domain 401 504 IPR012990 -
Lele21g0108 773 Pfam Gelsolin repeat 631 715 IPR007123 -
Lele21g0108 773 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 772 IPR037364 -
Lele21g0108 773 SUPERFAMILY beta-sandwich domain of Sec23/24 1 518 - -
Lele21g0108 773 CDD Sec23_C 611 741 IPR037550 GO:0030127|GO:0090114
Lele21g0108 773 SUPERFAMILY Helical domain of Sec23/24 519 621 IPR036175 GO:0006886|GO:0006888|GO:0030127
Lele21g0108 773 SUPERFAMILY Zn-finger domain of Sec23/24 31 102 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Lele21g0108 773 FunFam Protein transport protein SEC23 37 96 - -
Lele21g0108 773 Pfam Sec23/Sec24 trunk domain 124 390 IPR006896 GO:0006886|GO:0006888|GO:0030127
Lele21g0108 773 SUPERFAMILY vWA-like 125 391 IPR036465 -
Lele21g0108 773 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 622 772 IPR036180 -
Lele21g0108 773 Gene3D Sec23/Sec24 helical domain 516 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0108 Lele-ChrLele21 687270 692948 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0108 21 687270 692948 Lele23g1943 23 22465748 22471536 hybridization
Lele21g0108 21 687270 692948 Lele24g0101 24 654674 661284 hybridization