Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0098 ATGGTTTGTGGATCCAGTCATATTTTTCTGCTACGAAACTTGAACATTGCCATATCATGGTTTGGTTCACTTTACCAGCTGCCTCAATTTGATGGTATGGATGATCCTGTTTTGCCTTTCGAATCTTCAGAAGCAAGATTCAAACGCTCTTCTCATGCTCCAGGAAGATGGAGATTGGTCCAAAGACCGTTTCTGGTCCGTTGTCAGGTATTTGATACGTGGAAGAAAATTGAGGAATCACGGATTAATGAATTCAACTACGACAAAATAATACGTGCGCTGACTGAAGAAGGGATGATTGAAGAGGCAATGGCTGCGTTGCTGGAGATGAAAAATCATGGTCTCAAACCTCTAGGTGCGTACAGTCCAATAATTCACGGTTTCTCCATGGAAGGCAAATTTAGTGATGCTTTGTTTTTTCTAAGTGAGATGAATGCATCCAGTGTATTGCCGGAAACTGAAACCTATTCGAAGAAGGCATGGATATCGTTGTTGGAGAAATGCAAGAAGCCAAAGTTCAATGGTGTTACACTTGCTAATATTATTATCCTGGCTTATGTGAAGGGGAATGATTTCAAGCACTTGAGAATTTTTCTTTCTCAATTGTCAACCTATGGAGTGAAGCCTGACATTGTCACTATTGGAATTATTTTTGATGCAACTAGAAAGGGATTTGATGGCAGTGGAAATTTGGAAAAATGGAGAAGGATGGGCTATCTTCATAGAGTTGTAGAAATGGAAACAGATTCTCTGGTCCTTACTGCGTTTGGGAAAGGTCATTTTCTTAAGACCTGTGAAGAAGTGTACTACAGAGAAAGAAAAACATGGACTTATGATGGCCTCGTTGATTTAGTATCTGAACACATTTAA 870 0.3966 MVCGSSHIFLLRNLNIAISWFGSLYQLPQFDGMDDPVLPFESSEARFKRSSHAPGRWRLVQRPFLVRCQVFDTWKKIEESRINEFNYDKIIRALTEEGMIEEAMAALLEMKNHGLKPLGAYSPIIHGFSMEGKFSDALFFLSEMNASSVLPETETYSKKAWISLLEKCKKPKFNGVTLANIIILAYVKGNDFKHLRIFLSQLSTYGVKPDIVTIGIIFDATRKGFDGSGNLEKWRRMGYLHRVVEMETDSLVLTAFGKGHFLKTCEEVYYRERKTWTYDGLVDLVSEHI 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0098 289 PANTHER OS08G0520200 PROTEIN 69 158 - -
Lele24g0098 289 TIGRFAM PPR: pentatricopeptide repeat domain 87 117 IPR002885 -
Lele24g0098 289 Pfam PPR repeat 90 115 IPR002885 -
Lele24g0098 289 Pfam PPR repeat 121 145 IPR002885 -
Lele24g0098 289 Gene3D Tetratricopeptide repeat domain 65 175 IPR011990 GO:0005515
Lele24g0098 289 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 83 117 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0098 Lele-ChrLele24 640028 642850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0098 66 256 Miscellaneous Gene Families AT4G11690 22.857 6.73e-08 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0103 21 661852 663629 Lele24g0098 24 640028 642850 hybridization
Lele22g0110 22 631382 632631 Lele24g0098 24 640028 642850 hybridization